Gene Sbal195_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1928 
Symbol 
ID5753671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2298889 
End bp2300286 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content47% 
IMG OID641288209 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001554359 
Protein GI160875043 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0290384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGAT TAAAGGGGTT GGATGTGTAT TCACTGCGTT TGGTACTGAC ATTATTGATT 
TTGTCAGGTA TTTCAGTGTC CGTTGCTGTC TCTAGCTGGT TGAGTACTCG GGATTCTAAG
CATCAAATTG AAGAACTCTT CGATGCGCAA ATGCTGCAAA CCGCGAAAAT GCTGGAGCTG
TTTTATCACA CTGAGCCCGG TACGACGCCC CAGAGTACCG CGAGACCGCA AGTGCTCCAC
GTTCCCGATA GCCAGATCAG TTCCTTTGCC GAAAAAGCCG ATGCCCTGAA ACTCGCCTAT
GAGCATAAAT TGGCGTTTCA AATTTGGAGT GAGGCGGGCG AAGCCTTAGT GCTGTCGGAC
AATATTGGCC ATCAACCTAT CACCCGATTC GTGCAGGGTT ATCACAAGAA AGTGTTCGAA
GGTGAACTCT GGCATGTGTT CAGTTTTTTC TCGGTCAAAA ATCATGTTTG GATTGTCACC
GCTCAGCAGG ATGAAGTGCG CCAAGAGCTC GTATCACAAA TCATGCATAA CGCGGTTATC
GTGCCCTTGA TTGTGGTGCC TTTGACACTA CTTATCGTTA GCCTATTGTT TTATCTATTG
TTCCGGCCGT TAAAAACCTT TGAAAGGGAG CTGATTGGGC GGGCGCCGAA CGATCTTACG
CCGCTGACTA TGTCGCTACC GAAAGAGCTC GTACCCGTTC GCCGTGCATT AAACCTATAT
ATCAATAGCA TAGCTAGATT CATAGCCCGT GAACGCCGTT TTAGCGCCGA TGCCGCCCAT
GAACTGAAAA CCCCCTTATC TGTGATTAAA TTACATCAAC ACGGTTTAGA GAGCCTTATT
GATGATGATC CGCAGCAGAA ATTTCATCTA GCCGCGATTG ATGCTGGCGT GGTGCACATG
AGTCATACCG TTGAACAGTT ACTCGTGTTA GCGAGGGTGG ATTCGATAAA TGAGCTCAAT
GTGTCATCCC ACGCTATCTT GCCTATGGTT GAAGATGCGC TTAATCAACT GATGCCACAA
ATCACCGATT ATGAATGGAA TATCGATATC GCGCCCCAGC AGACCGTGAC CTGCGATCGT
TTCTATCTGC TACTGGTGCT AAAGAATATT ATTGAAAATG CCTGCAAATA CAGCCCGCAG
GAATCAGAAA TCTCAGTGTC GGCCCATTCA CTGGGTGATG AGATTAGTAT CTGTATTGCG
GATCGCGGCC AAGGCATGAC AGAGGAGCAG ATTGCTAATG CCACAGAGCG TTTTTATCGT
GTGAATGAAA ATGAAGGCAT AGGTGCGGGT TTAGGTTTGT CTATCTGCCA TCACATCATT
GAATTGCACC AAGGCCGTTT AGTGATAGCG CCCAGGGAGA AGGGCGGATT ATCTGTGACT
CTTTTTCTGC CGCAATAG
 
Protein sequence
MIRLKGLDVY SLRLVLTLLI LSGISVSVAV SSWLSTRDSK HQIEELFDAQ MLQTAKMLEL 
FYHTEPGTTP QSTARPQVLH VPDSQISSFA EKADALKLAY EHKLAFQIWS EAGEALVLSD
NIGHQPITRF VQGYHKKVFE GELWHVFSFF SVKNHVWIVT AQQDEVRQEL VSQIMHNAVI
VPLIVVPLTL LIVSLLFYLL FRPLKTFERE LIGRAPNDLT PLTMSLPKEL VPVRRALNLY
INSIARFIAR ERRFSADAAH ELKTPLSVIK LHQHGLESLI DDDPQQKFHL AAIDAGVVHM
SHTVEQLLVL ARVDSINELN VSSHAILPMV EDALNQLMPQ ITDYEWNIDI APQQTVTCDR
FYLLLVLKNI IENACKYSPQ ESEISVSAHS LGDEISICIA DRGQGMTEEQ IANATERFYR
VNENEGIGAG LGLSICHHII ELHQGRLVIA PREKGGLSVT LFLPQ