| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1915 |
|---|
| Symbol | |
|---|
| ID | 5753658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2283301 |
|---|
| End bp | 2284146 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641288196 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_001554346 |
|---|
| Protein GI | 160875030 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.228802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAAAG ACTGCGGCTG CTCCCTTACC CGCCACGACC ATGATCATTT AGGCGCGCAT
TCACATGTCG ATAGTCAAGA CCATAGCCAT GATAACGGGC ACAGTCATGA TCACAGCCAT
TCGCATGAGC ATGGCGCATC GCATAACTCA TTACATAGTC ATAGCGAGTT ACACACCAAT
CCTCAGTTAA ACGATAAAAA AACCTTGTCA GTCATCCACA AGATTTTAGA TAAAAATGAT
GTCGAAGCTG GTCATAACCG CGCCCACTTT GAGGCACATA AGATCACGGC CTTTAACATC
ATGAGTAGCC CAGGCAGCGG TAAAACGACC CTTTTAGAAA ATCTCAAAGA ATACACCAAG
CTCAACTATG CTGTGATTGA AGGCGACTTA GAAACCTCCC GCGATGCCGA CCGCTTAATC
GCGAAAGGCA TTACAGCCTA TCAAATTCAA ACGGGCTCGG CCTGTCACCT TGACGCCTTT
ATGGTGCACG GCGCCCTGCA TCATCTGCCA CTTGAAGGGC TGGATATTTG CTTTGTCGAA
AACGTCGGCA ATCTCGTCTG CCCAGCCAGT TATGACGTAG GTACCCACAA AAATATCGTG
CTGCTTTCCG TGCCAGAAGG CGATGATAAG ATTGAGAAAT ATCCTGTGAT GTTCCGCCGC
GCCGATGTTG TGTTTATCAC TAAGTGCGAT CTACTGCCCT ATTTTGATTT CAAGCTAGAC
GAAGCCAAAG CGCAGCTTAA AAAACTCAAT CCAGCAACTC AAATCATTGA AGTCTCCATT
AAAGATGGCG ACTCCATGCA GGCTGTGGCG GCTTGGCTTA AAGACAATAT TAGAGGTGCA
CAATAA
|
|---|
| Protein sequence | MCKDCGCSLT RHDHDHLGAH SHVDSQDHSH DNGHSHDHSH SHEHGASHNS LHSHSELHTN
PQLNDKKTLS VIHKILDKND VEAGHNRAHF EAHKITAFNI MSSPGSGKTT LLENLKEYTK
LNYAVIEGDL ETSRDADRLI AKGITAYQIQ TGSACHLDAF MVHGALHHLP LEGLDICFVE
NVGNLVCPAS YDVGTHKNIV LLSVPEGDDK IEKYPVMFRR ADVVFITKCD LLPYFDFKLD
EAKAQLKKLN PATQIIEVSI KDGDSMQAVA AWLKDNIRGA Q
|
|---|
| |