Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1879 |
Symbol | |
ID | 5753622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2247382 |
End bp | 2248407 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288160 |
Product | diguanylate cyclase |
Protein accession | YP_001554310 |
Protein GI | 160874994 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.182724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTAG AGTTATTACA AGCCGCTGCA CTGAATCTCA AAAAAGCAGT GCCTCTGATG CTCAAACATA AAATTCCGAC CACCCCGGTT AACTATGCGC TTTGGTACAC TTATGTTGGT GAACAGAATC CCGAATTAAA TCAACGACTC GATACCGTTA TCGCCCAGTA CAACACTTGT CCTCCTGTGA GTAGCGAACT CTTATATCGC CAGTATGTTG CCGATCCCGT TGAACTCGAT GTCCGCGAAA TGCGCCAGAA TCTGGATGCT ATGGTGACTG AGCTGTCCCA ATCGCTCAAA GATACCAATC TAGATGCCAA TGAATTCCAG TCGCGCATCG AGAGTAATTT TGAAAAGCTC AACCGCATCG AAGATGAGGG TTTTAGTGTT GAGCAAGTGC TCGATCTGGT GCGCAGTTTA GTGAAAGAGT CGGACAATAT TCGCTCGAGC ACTGAGTTCT TTACCGGACA ATTGCAGAAA GCGCAAACCG AAATCGATGC GCTAAAGAAA AAGCTCGAAC AGACAGAAAA AGATGTGCTC TACGATGCGC TGACTGGCTG CTTTAATCGC CGCGCCTTCG ACAGCGATTT TGCTGGCATG TTAGCCCAAG CGCCCTTAGG CACCTGCGTG ATCTTGGCCG ATATCGACCA TTTTAAAGTG TTTAACGACA CCTACGGCCA CCAGCTCGGC GACCAAGTGT TACGCGCCGT GGCAAAACGG CTACAGGAAT CCTGCCGCGA TGGCGCAAAA CTGTATCGTT TTGGCGGTGA AGAATTTGTG ATTATTGTGC CTAAAAGTCA GTTACGCATC GCAAGGCAAC TGGCCGAAGC CATGCGCCGT GGACTCGAAA AGCTCAGTTT GAAAGACAGA CGTAAAGACG AGCGCATCAA TAATATCAGT GCCTCATTTG GGGTTGCCCA ATGGCAAGAA AAACAAACGG GCATGCAGTT GATTGAAGCG GCAGATAAAT TACTCTATGA CGCGAAACGT TTAGGTCGAA ATCGCGTGTT GCCGATCAGC AACTGA
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Protein sequence | MSLELLQAAA LNLKKAVPLM LKHKIPTTPV NYALWYTYVG EQNPELNQRL DTVIAQYNTC PPVSSELLYR QYVADPVELD VREMRQNLDA MVTELSQSLK DTNLDANEFQ SRIESNFEKL NRIEDEGFSV EQVLDLVRSL VKESDNIRSS TEFFTGQLQK AQTEIDALKK KLEQTEKDVL YDALTGCFNR RAFDSDFAGM LAQAPLGTCV ILADIDHFKV FNDTYGHQLG DQVLRAVAKR LQESCRDGAK LYRFGGEEFV IIVPKSQLRI ARQLAEAMRR GLEKLSLKDR RKDERINNIS ASFGVAQWQE KQTGMQLIEA ADKLLYDAKR LGRNRVLPIS N
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