Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1874 |
Symbol | |
ID | 5753617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2239992 |
End bp | 2242160 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288155 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001554305 |
Protein GI | 160874989 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.152137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTT TCCCCTTTGG TCTACGCACT AAAGTCATCG GCCTTAGCCT ATTTTTGCTC TGCCTACCTT GGCTGGGGTA CCAATATGTG TGGGAGATGG AAAAGTATCT TCGCCACGGT CAAGAACGCA CCTTAGAAGG CACCACTCAG GCATTGGCCA CCGCACTGCA CGAACGGCCG AAATTGTTCG ATGGACAAGC GAGCTTTTTA AAGCAAGTGG AAAAGAGTCG CGATCTGTAC GCCTATCAAC TCAATGGGGC GATTCTGCTC GACGGCAAAC TTAACGAATG GGAAGAGTAT CAGCACAGAT TTATCCAGTA CGGTGAGGCG CATCAGATCA TGCGCGCCGA GCCTAACGCG CCGCTGACCT TAAGCTTTAC CCACATGGTC GGCCAGTACG ATGGTTATCT GTATGCCTTC TTTCAAGTGA CCGACCCAAC TGTGGTGCTG CGTGGCAAAA ATGCGTTAAG TGTCGATAGA AACGATCATC TCTCGATTGC GACACTCGCG CCCGACAATA AATTCAAGCG CTATATCGTT GCCACCACGC AACCCGGCTG GATCAGTGCC TTCGAGTTAC CTGCCAATCC TAAGCAAACC GTGCCCGTCA AACCTGAAGT GCGCATACAA GGACAATGGG CGACCACAGA TGTGGGCTAC AATGTCGAGC TGCGTATTCC CTTAGACATG GTCGGCAGCA AACTCGGTTT TGCCATTTCC GATGTTAACG ACAGCAAAAA CCGCGATGTG GCAGCCGTTG TCGGCACCTC GGCCTTAGAT ACGGTCGATA ATCTCGGCAC TGTGTTGGTG CCATCGCCAG AAATTGAAAA CATTATCAAA GGCATGAGCC ACTATAGCTC ACGCATTTGG GTAGTCGATA AGCACGGCCG CGTACTGGCA AAATCGGGCG ATATTCGTGC CAATGATAGC GTGTGGACCC GCACCTTAGA AGATGAAAAG AGCACCACGC TATGGGAAAC CTTCAAGCGC GATTACTTGC ATCCGCTGTA CTATAAAATC CTCACTAAGC CGCCCAAAGA CTTTATCGAC TCCTTGCAAG ACTCCACCGA GCTTGATGGC AGTCATATCC AAAAAGCACT AGCTGGTCAG CAAAGTTCAA CTTGGCGCTT AACCCCAGAC AATAAAGCTG TGGTACTTGC CGCCGCCAGC CCTATTTGGA TAGATAACAA TGTGATGGGC GCCGTTGTCG CCGAAGAAAC CACCCACGGG ATCCGTACCC TGCGTAACCG CGCGCTGGAA AAACTCTTTA ACGTGATTTT GACCATTATG AGCATGGGCA CTTTGGCGCT GTTCTTTTTC GCTTCGAGCA TTTCTAACCG TATCCGTAAA CTGCGCGATG AGGCCGAAAA TGCCATTGAT AGCCAAGGCC GCGTTCGTAA TCACCTCAAA CCGTCTAAAG CTCGGGATGA AATTGGCGAT CTGTCCCGCA GTTTCTCCAA CATTGTCGGA CGGCTTGGTC AATACACACA TTATCTGGAA AATATGTCGT CGCGCCTGTC CCATGAGCTG CGCACGCCCG TGGCGGTTGT GCGATCATCC CTTGAGCATT TAAACCTGCA AACCTTAGAT AAAGACACGC AGAAATATGT CGACCGCGCC CAAGAAGGTG TCAGCCGCTT AAGCATGATT TTAAATAACA TGAGCGAAGC AACGCGCTTA GAGCAGAGTT TAACGCAGGC CGATATCACT AAATTCCCAC TCTCCCAAGT GGTTAGCGGT TGTATGCAAG GTTATCAAAT GACCTATCCA GAACAAGGCT TTAGCGTAAA AGTGCCCGAG CAACCTCTGA TGATGCAAGG TGTGCCGGAA TATATCGCCC AGTTGATGGA CAAACTTATC GCTAACGCGA TTGAATTTTG CGATAAAGGC AGCGCCATCG AAGTCACGCT CACCCAAGTC GGTAAGCAAG CAACTTTGCT TATCAGTAAC TTAGGACCAG AACTGCCCGT TGATATGTCG GAGCAGATTT TCGACTCCAT GGTGTCGGTG CGGATAAATC AAGCCCAAGA CAAACCTCAT CTCGGTTTAG GTCTGTATAT CGCACGATTG GTCGCCGAGT TCCACCAAGG ACAAATCCTC GCCCGCAATC GCAGCGAGCA TAATGGCGTC GATATCCTAG TAACCTTGCC TTTGAGCCCT GCTTCATAA
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Protein sequence | MTRFPFGLRT KVIGLSLFLL CLPWLGYQYV WEMEKYLRHG QERTLEGTTQ ALATALHERP KLFDGQASFL KQVEKSRDLY AYQLNGAILL DGKLNEWEEY QHRFIQYGEA HQIMRAEPNA PLTLSFTHMV GQYDGYLYAF FQVTDPTVVL RGKNALSVDR NDHLSIATLA PDNKFKRYIV ATTQPGWISA FELPANPKQT VPVKPEVRIQ GQWATTDVGY NVELRIPLDM VGSKLGFAIS DVNDSKNRDV AAVVGTSALD TVDNLGTVLV PSPEIENIIK GMSHYSSRIW VVDKHGRVLA KSGDIRANDS VWTRTLEDEK STTLWETFKR DYLHPLYYKI LTKPPKDFID SLQDSTELDG SHIQKALAGQ QSSTWRLTPD NKAVVLAAAS PIWIDNNVMG AVVAEETTHG IRTLRNRALE KLFNVILTIM SMGTLALFFF ASSISNRIRK LRDEAENAID SQGRVRNHLK PSKARDEIGD LSRSFSNIVG RLGQYTHYLE NMSSRLSHEL RTPVAVVRSS LEHLNLQTLD KDTQKYVDRA QEGVSRLSMI LNNMSEATRL EQSLTQADIT KFPLSQVVSG CMQGYQMTYP EQGFSVKVPE QPLMMQGVPE YIAQLMDKLI ANAIEFCDKG SAIEVTLTQV GKQATLLISN LGPELPVDMS EQIFDSMVSV RINQAQDKPH LGLGLYIARL VAEFHQGQIL ARNRSEHNGV DILVTLPLSP AS
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