| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1833 |
|---|
| Symbol | |
|---|
| ID | 5753576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2197922 |
|---|
| End bp | 2199688 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641288114 |
|---|
| Product | peptidase M61 domain-containing protein |
|---|
| Protein accession | YP_001554264 |
|---|
| Protein GI | 160874948 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.180566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.794619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCATT ACCAGATAAT CCCCGTCGAT CCGAAAGCCC ATTTATTCGC AGTCACTATG
ACATTATCCC AGCCCAAGCC TGTGCAGGTC TTTAGCCTAC CCGCTTGGCT GCCTGGCAGT
TATATGGTGC GCGACTTTGC TAAAAATATC ATTGAACTCA AGGCGCAAGC TGCTAATGGC
CTAACACTTA AACTCACCCA GCTAGATAAG CAAACTTGGT CGGTTGACAA TAATAGCAGC
GAAATCATTT TGACTTATCA AGTGTATGCT TGGGATCTGT CGGTGCGCAC TGCGCATTTG
GACACGACCC ACAGCTTCTT TAACGGCAGT AGCGTGTTTT TATCCGCCCA CGGTTTTGAA
CAACAAACCC ACACCGTCAC TATGTTACCG CCCTCTGAGC CAACATTAAG TGACTGGCGC
GTCGCTACCA GCATGACCCG CATCAGTGGT GACGACTTTG CCTTCGGCCA ATTTAGTGCC
ACAAGCTATG ACGAGCTTAT CGATCATCCA GTGGAAATGG GCTTATTTAC CTTAGCCAGT
TTCGATGCCT GCGGCGTCCA ACACGATATC GTCCTCAATG GCCGCCACCG CGCTTGCATG
CCAAGGCTCT GCCAAGACTT AAAAGCCATT TGTGAGTATC AAATCAATCT CTTCGGCACG
CCTGCGCCGT TTAAACGTTA TTTGTTTATG ACCACAGTAT TAGACAATGG CTTTGGCGGA
TTAGAGCACA GAGCTTCTAC CGCATTAATG TGTTCACGCA AGGATTTGCC GCTATCGCTC
AATGCGCCAA TTAATAACGA CTATCGCACT TATTTATCCC TGTGCAGCCA CGAGTATTTC
CACAGCTGGA ACGTGAAGAG GATTAAGCCG GAGTGCTTTT TACCCTATAA ACTTGAGGCT
GAAACCTATA CGCCACAACT GTGGGCCTAT GAAGGCATCA CCTCTTATTA TGATGACTTC
CTTACCTATC GCGCCGGACT GGTAGATGAA CAAAGCTATT TAGATATGCT GAGTGAGACC
TTCACCCGCG TCTATCGCAG CCAAGGACGC TTTAAACAAA GTGTTAAAGA TTCAAGCTTT
AATGCCTGGA CTAAGTTCTA TAAGCAGGAT GAAAACGCGC AAAACGCCAT CATCAGTTAT
TACACCAAAG GCGCGCTGTT TGCGCTGTAC TTAGATTTAA CCCTGCGCAG TGAAACCCAA
GGCAAATACA ATCTCGACCA TGTTATGCAG ATTTTATGGC AGGAATATGC TCTGCAAGAC
AAGGGCACGA CTGACAGCTG TCACCAAGCG ATTATCGAGC GACTCCTAGG CCGTGATTGC
CACGATTTGT TTGCCTACTT AGAGAACACC GACGATATTC CACTGGCTCC GCTACTTGCC
GAATTTGGCG TCGAGTTTAA CCTTCGAGCC AGCCAAGGTC CGCAGGATGT GGGCGGCGGG
CAAGCGAAAG GTTATGACAT TGCCTTTGGC GCGAAAACTC AAGCGGCGCC GATGGGATTG
AAAGTGGTGA CTGTTACCCA AGGCAGCCCT GCCCACCTTG CGGGATTAAG TGCGGGGGAT
ATCTTAATCG CCGCCGATAA CTTGCAAGTC AGCGCGCAAT TTGAGTCGCA GCTACAGCAA
TATCCGCTGG GTGAATCCTT GAAGCTATAT TGGTTTAGAC GGGATGAATT GATGACGGGT
GAATTGATGA TAACTGCCGC GCCGAAGGAC ACTGTCGCCC TAGCAATTAG TGACAAGACT
AAGCTCGCGG CTTGGTTAGG ACGTTAA
|
|---|
| Protein sequence | MIHYQIIPVD PKAHLFAVTM TLSQPKPVQV FSLPAWLPGS YMVRDFAKNI IELKAQAANG
LTLKLTQLDK QTWSVDNNSS EIILTYQVYA WDLSVRTAHL DTTHSFFNGS SVFLSAHGFE
QQTHTVTMLP PSEPTLSDWR VATSMTRISG DDFAFGQFSA TSYDELIDHP VEMGLFTLAS
FDACGVQHDI VLNGRHRACM PRLCQDLKAI CEYQINLFGT PAPFKRYLFM TTVLDNGFGG
LEHRASTALM CSRKDLPLSL NAPINNDYRT YLSLCSHEYF HSWNVKRIKP ECFLPYKLEA
ETYTPQLWAY EGITSYYDDF LTYRAGLVDE QSYLDMLSET FTRVYRSQGR FKQSVKDSSF
NAWTKFYKQD ENAQNAIISY YTKGALFALY LDLTLRSETQ GKYNLDHVMQ ILWQEYALQD
KGTTDSCHQA IIERLLGRDC HDLFAYLENT DDIPLAPLLA EFGVEFNLRA SQGPQDVGGG
QAKGYDIAFG AKTQAAPMGL KVVTVTQGSP AHLAGLSAGD ILIAADNLQV SAQFESQLQQ
YPLGESLKLY WFRRDELMTG ELMITAAPKD TVALAISDKT KLAAWLGR
|
|---|
| |