Gene Sbal195_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1805 
Symbol 
ID5753548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2166402 
End bp2168315 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content46% 
IMG OID641288086 
Productarginine decarboxylase 
Protein accessionYP_001554236 
Protein GI160874920 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1166] Arginine decarboxylase (spermidine biosynthesis) 
TIGRFAM ID[TIGR01273] arginine decarboxylase, biosynthetic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0026532 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATT GGTCTATTGA TGATGCTCGT GCTGGGTACA ATGTTACTCA CTGGAGCCAA 
GGTTTTTATG GGATCAGCGA TCACGGTGAG GTGACAGTGT CACCAGACCC AAAAAATCCT
GATTACAAGA TTGGCTTAAA TGAGCTAGCC AAAGACATGG TTAAAGCGGG CGTCGCTTTA
CCTGTACTAG TTCGTTTTCC GCAGATCCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAGAA GTACGAGTAT CAGGCGGACT ATTTGCTGGT TTACCCCATT
AAAGTAAACC AACAGCAAAC TGTGGTGGAA GAGATCCTGG CGAGTCAGGC ATCAAAAGAA
GTACCACAAC TGGGTTTAGA AGCAGGCAGT AAGCCTGAGC TGATGGCTGT GTTAGCCATG
GCGCAAAAAG CCAGTTCAGT CATTGTGTGT AATGGTTATA AAGATAATGA ATATATCCGT
TTAGCATTGA TTGGTGAAAA GTTAGGCCAC AAGGTTTACA TCGTTTTAGA AAAACTGTCT
GAACTGAAAA TGGTGTTAGC GGAATCTAAG CGTCTTGGTG TGACACCGCG TTTAGGTCTG
CGTGCGCGTT TAGCGTTCCA AGGCAAAGGC AAATGGCAGG CGAGCGGCGG TGAGAAGTCT
AAGTTCGGTC TATCTGCTGC ACAAATTTTG CTAGTTGTTG AACAACTTAA GCAAAACGAT
ATGCTAGATT CGCTGCAATT GCTGCATTTC CACTTAGGTT CGCAAATCGC TAACATTCGT
GATATTCGCC AAGGTGTGAG TGAAGCGGGT CGTTTCTATT GTGAATTACG TGCATTAGGC
GCAAGCGTTA ACTGCTTCGA CGTCGGTGGT GGTTTAGCGG TGGATTACGA TGGCACACGT
AGCCAAAGTA ATAACTCGAT GAACTATGGC CTGACCGAAT ACGCCAACAA TATCGTTAAC
GTATTGACCG ACATCTGTAA TGAATACGAG CAGCCTATGC CACGTATTAT TTCAGAGTCT
GGCCGTTACT TAACCGCGCA CCATGCTGTG CTGATTACCG ATGTTATCGG TACTGAAGCT
TATCAGCCTG AAGATATTCA ACCGCCAGCA GAAGAGTCAC CACAGTTATT GCATAACATG
TGGCATTCAT GGTCTGAGCT TAGCGGCCGC GCCGATCAAC GTGCCTTGAT TGAGATTTAT
CACGATAGCC AAAGTGACTT ACAAGAAGCG CATTCGCTAT TCGCTTTAGG TCAATTGAGC
TTGGCAGAAC GTGCTTGGGC TGAACAAGCT AACCTGCGTG TGTGCCATGA AGTGCAAGGG
CTATTGAGTG CGAAGAACCG TTATCACAGA CCTATCATTG ATGAGCTCAA TGAAAAGTTA
GCCGATAAAT TCTTTGTTAA CTTCTCATTA TTCCAGTCAC TACCGGATGC TTGGGGTATT
GACCAAGTGT TCCCAGTATT GCCGTTGTCG GGTTTAGATA AAGCCCCTGA GCGCCGTGCT
GTGATGCTTG ATATCACCTG TGACTCTGAC GGTATTGTCG ATCAATACGT TGATGGTCAA
GGGATTGAAA CCACATTGCC AGTACCAGCC TGGAGTGCGG ATAGCCCGTA TCTGATTGGT
TTCTTCCTTG TGGGCGCATA CCAAGAAATC TTGGGTGATA TGCATAACCT GTTTGGTGAT
ACTAACTCTG CGGTTGTTCG CATCGAAGAT AACGGTGTGA CGAACATTGA ATCGGTATTA
GCGGGTGATA CTGTCGCTGA CGTATTGCGT TACGTTAACT TAGATGCAGT GGCCTTTATG
CGCACTTACG AAGAGTTAGT GAATTTGCAT ATTGCCAAAG ATGAACGCGC ACAAATTCTA
GAAGAATTGC AAGTCGGCCT GAAAGGCTAC ACTTACTTGG AAGATTTTTC TTAA
 
Protein sequence
MNDWSIDDAR AGYNVTHWSQ GFYGISDHGE VTVSPDPKNP DYKIGLNELA KDMVKAGVAL 
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQQTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVTPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL LVVEQLKQND
MLDSLQLLHF HLGSQIANIR DIRQGVSEAG RFYCELRALG ASVNCFDVGG GLAVDYDGTR
SQSNNSMNYG LTEYANNIVN VLTDICNEYE QPMPRIISES GRYLTAHHAV LITDVIGTEA
YQPEDIQPPA EESPQLLHNM WHSWSELSGR ADQRALIEIY HDSQSDLQEA HSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSAKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSADSPYLIG
FFLVGAYQEI LGDMHNLFGD TNSAVVRIED NGVTNIESVL AGDTVADVLR YVNLDAVAFM
RTYEELVNLH IAKDERAQIL EELQVGLKGY TYLEDFS