| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1791 |
|---|
| Symbol | |
|---|
| ID | 5753534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2146903 |
|---|
| End bp | 2148855 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641288072 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_001554222 |
|---|
| Protein GI | 160874906 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGC AGTCTCTCTA CAAAGTCTCC GGCAATATCG CTGCCAATGC ACTTGTAAAC
AACGATAAAT ATAAAACAAT GTACCAAGAG TCGATTGTCA ATCCTGAAGG TTTCTGGAGA
GAACACGGCA AGCGTATTGA TTGGATAAAA CCCTATACCA AAATTAAAAA AACCTCTTTT
GATGATCATA ATTTATCGAT CAACTGGTTT TACGACGGCA CCCTAAATGC TTCTGCCAAC
TGTTTAGATC GTCACTTAGC TGAGCACAGT GATCGCGTGG CGATTATTTG GGAAGGCGAC
AACGCCAGCG AACAACGCAA AATTACCTAC GGTGAATTAC ATGCAGAGGT GTGTAAATTC
GCTAACGCAT TACGCAGCCA AGGCGTGCGC CGCGGTGACA TAGTCACGAT TTACATGCCT
ATGGTGCCAG AAGCCGCAGT GGCTATGCTC GCCTGTGCCC GTATCGGCGC TGTGCACTCC
GTGGTCTTCG GTGGTTTCTC ACCGGATTCT ATCGCCTCTC GCGTGATTGA TGGCAAATCA
AAAGTCATTA TTACCTCAGA TGAAGGTATG CGCGGTGGCC GTGCTATCCC ATTGAAACGC
AACATCGATG ATGCCTTAAA AAATCCTGAT GTTACTACGG TTGAGAAAGT CATAGTGCTG
AAGCGCACGG GCGGCATAGT GGATTGGGTA GAAGACCGAG ATGTGTGGTG GCACTCACTG
ATGGAAACCG CATCTGAGTA CTGCCAACCA GAGGAAATGG ATGCCGAAGC GCCGTTATTC
CTGCTGTATA CCTCAGGTTC AACCGGTAAT CCCAAGGGCG TATTGCACAC CACTGGTGGC
TACATGGTTT ATGCGTCTAT GACCCATGAA TATGTGTTCG ACTACAAAGC GGGCGAAGTG
TACTGGTGTA CCGCCGATGT GGGTTGGATC ACTGGCCACT CTTATATGGT TTACGGCCCA
CTCGCCAATG GTGCGACTGT GCTCATCCAT GAAGGCGTTC CGAATCATCC AAGCCCTGCC
CGTTTAGGCG AAATGATTGA CCGCCATAAA GTGAGCATTC TTTACACAGC GCCAACTTTA
ATTCGCGCGC TGATGGCCGA AGGTAAACAA CACTTCGATA AGTTCGATGG TAGCAGCTTG
AGGATCATGG GCTCAGTAGG CGAACCCATC AACCCAGAAG CATGGCGTTG GTACCATGAA
GTCATAGGTC ATGAACATTG CCCTATCGTC GATACTTGGT GGCAAACTGA AACTGGCGGT
ATTTTGATCA CGCCACTGCC TGGGGCGACC GACACTAAAC CTGGTTCAGC GACCCGTCCG
TTCTTTGGCG TTCAACCTGC CTTAGTCGAT AACATGGGTA ATATTTTAGA GGGTGAGAAC
GAAGGTAACT TAGTGTTACT CGACTCTTGG CCGGGCCAAA TGCGAACTGT ATATGGCGAC
CACGAACGAT TCGTACTGAC CTATTTTAAA ACCTTCCGTG GCATGTATTT TACCGGTGAC
GGTGCCCGTC GCGATGAAGA TGGTTACTAC TGGATAACAG GCCGCGTCGA TGACGTGATC
AACGTATCCG GCCACAGATT AGGTACGGCA GAGGTAGAAA GTGCGCTGGT ATCACATGAA
CTGGTTGCAG AAGCTGCAGT AGTTGGCTAC CCACACGATA TTAAAGGCCA AGGTATTTAT
GCGTATGTCA CGCTAACCCG CGGCACTGAA GAAACCGAAG AGCTACGTCA AGAGCTGCGT
CAATGGGTCC GTAAAGAAAT TGGTGCGCTG GCAACCCCAG ATCTCATCCA ATGGGCGACA
GGCTTACCTA AGACTCGTTC GGGCAAGATC ATGCGCCGCT TCCTGCGTAA GATTGCCGCT
AACGAAGTGA CCAATTTAGG GGATGCATCA ACCTTGGCCG ATCCAGCTGT GATCGAGACC
TTGATTGAAT CACGCTTGAA TCGTACTGAG TAA
|
|---|
| Protein sequence | MSSQSLYKVS GNIAANALVN NDKYKTMYQE SIVNPEGFWR EHGKRIDWIK PYTKIKKTSF
DDHNLSINWF YDGTLNASAN CLDRHLAEHS DRVAIIWEGD NASEQRKITY GELHAEVCKF
ANALRSQGVR RGDIVTIYMP MVPEAAVAML ACARIGAVHS VVFGGFSPDS IASRVIDGKS
KVIITSDEGM RGGRAIPLKR NIDDALKNPD VTTVEKVIVL KRTGGIVDWV EDRDVWWHSL
METASEYCQP EEMDAEAPLF LLYTSGSTGN PKGVLHTTGG YMVYASMTHE YVFDYKAGEV
YWCTADVGWI TGHSYMVYGP LANGATVLIH EGVPNHPSPA RLGEMIDRHK VSILYTAPTL
IRALMAEGKQ HFDKFDGSSL RIMGSVGEPI NPEAWRWYHE VIGHEHCPIV DTWWQTETGG
ILITPLPGAT DTKPGSATRP FFGVQPALVD NMGNILEGEN EGNLVLLDSW PGQMRTVYGD
HERFVLTYFK TFRGMYFTGD GARRDEDGYY WITGRVDDVI NVSGHRLGTA EVESALVSHE
LVAEAAVVGY PHDIKGQGIY AYVTLTRGTE ETEELRQELR QWVRKEIGAL ATPDLIQWAT
GLPKTRSGKI MRRFLRKIAA NEVTNLGDAS TLADPAVIET LIESRLNRTE
|
|---|
| |