Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1790 |
Symbol | |
ID | 5753533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2144926 |
End bp | 2146680 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288071 |
Product | type III restriction protein res subunit |
Protein accession | YP_001554221 |
Protein GI | 160874905 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.766528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAGTCA AACTCAGAGA CTATCAACAG CAAGCGGTTA ATGCCGCCAT CGCCCATTTT AGGCAAAGCC AAGCTTCCGC CGTACTCGTA TTGCCCACAG GCGCCGGCAA AAGCATAGTG ATCGCCGAAC TGGCGCGCAT CGCCAAAGGC AGAGTCTTAG TACTCACCCA CGTGAAAGAA TTAGTCGCGC AAAATGCTGA GAAAGTCGGC CTACTCACGG CACAAGCCAG TATCTATGCG GCGGGACTCA ATCAAAAAGC CACTGACGGA AAAACCGTCG TCGCCAGCAT TCAATCGGCG GCGCGGGGGT TAACCCAGTT CGACAAGCCG TTCTCGTTAG TCATTATTGA TGAATGCCAC AGAGTCAGCC TTGAGAAAAC CAGCCAGTAT CAGCAAGTAC TCAACCATTT ACGCACTAAA AATCCCCAAC TAAGATTACT CGGACTCACC GCTACGCCCT ATCGCCTTGG CACTGGCTGG ATTTACCAGC AGCACTATCA CGGCAAAGTG GGTTCGCCCG AACATGCCAT GTTTGAACAT TGTGTGTTCG AGCTGCCCAT CAGGCCACTC ATTAAACAAG GTTACCTCAC AGCACCAACG CTGTTTGACG GCCTCAGTGC CCAGTACGAT TTCAGCCAAC TGAAAGCGAA CGACAATGGC GAGTATGCTG AAGCCGAGGT TAACGATTTG CTGGGGCATT ACGGCCGCGC GACCACAGCG ATAGTGAAAC AGCTCATTGA ACTGAGCCAA CATAGAAAAG GCATTATCAT CTTTGCGGCA ACGGTGCGCC ACGCCAATGA GATTTTTGGC CTACTCAACC AAGTTCACAC TGCACAGAGC GCCATAATCA CGGCACAAAC GCACGACAAT GAACGTGACG CGACAATCGA ACGTTTTAAA GCCCAAGAGC TCAAGTTTTT AGTCAACGTG GCAGTGTTGA CGACAGGCTT CGACGCGCCC CATGTGGATT TGATTGCGAT TTTGCGCCCA ACCGCCTCAG TCAGTCTATT TCAACAAATG ATCGGCCGTG GGTTGCGAAT CGCTGAAGGC AAAAAAGATT GTCTTATCAT CGACTATGCT GCCAATGGTT ATGACTTGTA TTTCCCCGAG GTCGGCCAAG CGAAACCCAA CAGTAAATCG GTACCCGTGC AAGTGCATTG CCCTGTGTGC GATTTTGCCA ATATTTTCTG GGGACTCACG GACGACGATG GCGACATCAT TGAACACTTT GGTCGCCGTT GTCAGGGCAT AGTCGAACAG CAAGGTAAAA AGCTACAGTG CGACTTTCGA TTTAGATCTA AATCTTGCCC TGATTGCGGT GAAGAGAATG ATATTGCCGC GCGCATTTGC CAGCACTGCC AATCGACTCT CATCGATCCC GATAAACGCC TTCGCCAAGT GCTCAGCCAG CAGCACCATC ATTTGTTCCG CTGCCAACAT ATGACGCTAA TCGACGATGA CGGCAATCTG AAAGTGCAAT ACCTCGATAT CGACGGCAAT GAATTCAATC GCCGCTTTAA ATTGCAAACG CCGGCCCAGT GGCGAGCCCT ATATGCCTTA TTCATCTTTC CCCATAGCCG TACACCGGGA TTAAAACCGA AAAAGTACAC TAAAGTGGCA GAGTTAATCA GCGACGCGGA TAAATTCCGC ATGCCCGATC TCTTGCTGCT GAAGAAACAT AAAAAAGGCT GGGATCTGCT CGAAAGCTAT TTTGATTATC AAGGCCGCTA TCAAACTGAA AATAAACTCG GCTGA
|
Protein sequence | MSVKLRDYQQ QAVNAAIAHF RQSQASAVLV LPTGAGKSIV IAELARIAKG RVLVLTHVKE LVAQNAEKVG LLTAQASIYA AGLNQKATDG KTVVASIQSA ARGLTQFDKP FSLVIIDECH RVSLEKTSQY QQVLNHLRTK NPQLRLLGLT ATPYRLGTGW IYQQHYHGKV GSPEHAMFEH CVFELPIRPL IKQGYLTAPT LFDGLSAQYD FSQLKANDNG EYAEAEVNDL LGHYGRATTA IVKQLIELSQ HRKGIIIFAA TVRHANEIFG LLNQVHTAQS AIITAQTHDN ERDATIERFK AQELKFLVNV AVLTTGFDAP HVDLIAILRP TASVSLFQQM IGRGLRIAEG KKDCLIIDYA ANGYDLYFPE VGQAKPNSKS VPVQVHCPVC DFANIFWGLT DDDGDIIEHF GRRCQGIVEQ QGKKLQCDFR FRSKSCPDCG EENDIAARIC QHCQSTLIDP DKRLRQVLSQ QHHHLFRCQH MTLIDDDGNL KVQYLDIDGN EFNRRFKLQT PAQWRALYAL FIFPHSRTPG LKPKKYTKVA ELISDADKFR MPDLLLLKKH KKGWDLLESY FDYQGRYQTE NKLG
|
| |