Gene Sbal195_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1786 
Symbol 
ID5753522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2140464 
End bp2141000 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content46% 
IMG OID641288060 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_001554217 
Protein GI160874901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000724127 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA ATAAGTTGTT AAAAGCTATG TTGGTAGCAC TTCCAATTAT GGCTCTTAGT 
GCATGTAGCT CAACTTCAGA ATCAGAAACT GATGCAATGG GCTCAACAAA CGGTTCAGGT
AGTGAACTGA ATGGTGGTGG CATTCAAACT GGTGGTGTAG GCGCAATGTT GTCTGCTGAA
GAGCAACAAC GCCAGCAGTT AGAAGACTTA AGAAAGCAAC ACATCATTTA CTTCGACTTT
GACCGCAGTG AAGTTCAAAC TGATTTCGCC GCAATCTTAG AAGCTCATGG CACTTACTTA
GTTGAGCACC CAAGCGTGCG CGTACTGATT GAAGGCCATG CGGATGAGCG TGGCACGCCT
GAGTACAACA TCGCACTGGG CGAACGTCGT GCTAAAGCCG TTGCTAAATA CCTACAAGGT
ATGGGCGTAC AGCCAAGCCA AATGAGCGTA GTCAGCTATG GCGAAGAAAA ACCACTTGAT
TTTTCTCGCA CTGATGAAGG TTTTGGCAAA AACCGTCGTG CAGTTTTAGT TTACTAA
 
Protein sequence
MDLNKLLKAM LVALPIMALS ACSSTSESET DAMGSTNGSG SELNGGGIQT GGVGAMLSAE 
EQQRQQLEDL RKQHIIYFDF DRSEVQTDFA AILEAHGTYL VEHPSVRVLI EGHADERGTP
EYNIALGERR AKAVAKYLQG MGVQPSQMSV VSYGEEKPLD FSRTDEGFGK NRRAVLVY