| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1785 |
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| Symbol | tolB |
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| ID | 5753521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2139089 |
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| End bp | 2140417 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641288059 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001554216 |
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| Protein GI | 160874900 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000978843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT TGGCAAAATG GTTAGCATTG GCAGTTCTGC TATGCACCAC CCCCGCAAAA
GCGGCATTGG ATATTGTGAT CACAGAAGGT GTTGACGCTG CGCGTCCCAT CGCTGTGATG
CCTTTTGTTT GGCAAGGTCC TGGCGCCGCA CCGCAAGCGA TTGCGGATGT AGTGATGTCG
GACTTAGTGC GTAGCGGTAC GTTTAAACCT TTAGACGAAC TTGGACTGCC TCAGCGTAAT
ATTGGCACTG TGGCACAGTT TCAAGCTAAT TCTTGGTCAA GTGTTGGCGC CGAAGCGTTA
GTGCTAGGTA CCGTTAAACC TTATGGTACC GATCAATATT TGGTGAGCTT TGATTTAATC
GATTTAGTCA AAGCCCAAAA CCAAGCGTTG AAAGGCCCAG TTAGTGCAAC AGAATTTTTG
ATGGACAGCC GTCAAACTGT GATTTCAGCG GCGCAATTTC GCCAATATGG ACACAGGATC
AGCGATATCG TCTATGAAAA GTTAACCGGT ATTCGCGGCG CATTCTTGAC GCGGATCTCC
TATGTTGTGG TCAATCATAC TCAAAAAGCC CCTTATCAAT TGATGGTTGC TGATTATGAT
GGCGTCAATG AACAAATGTT ACTGCGCTCG CCAGAGCCGT TGATGTCACC TACTTGGTCA
CCCGATGGTC GTCGTTTAGC GTATGTAAGC TTTGAAAACA AAAAAGCTGA GATCTTCGTG
CAAGACCTTT ATACCCAAGT GCGCACGAAA GTGAGCTCTT TCCCTGGTAT TAACGGTGCG
CCGGCGTTCT CACCCGATGG AAAATCTTTG GCGATCACTT TATCTAAAGA CGGTCAGCCT
GAAATTTACA TCATAGATAT TGCGACCAAA GCCATTAAGC GTATTACTAA TCACTATGCT
ATCGATACTG AGCCATCATG GTATCCTGAT GGAAAGTCGT TGATTTTTAC ATCAGAGCGC
GGTGGTAGAC CACAGATTTA TCGCGTAGAG TTGAGCTCAG GTAAAGTGAG TCGCGAAACC
TTTGAAGGTG AATGGAACCT CGGTGGTTCA ATTACCCCTG ATGGTCGCAG TATGATTTTT
GTTAATCGCA CGAACGGTAA ATTTAATATT GCGCGTATGG ATTTAAGTAC GCGTTTTATG
CAGGTGCTGA CATCGACACG TTTGGATGAA TCTCCAAGTG TGGCCCCTAA TGGTACTATG
GTGATCTATG GCACTACATA CCAAGGCAAG CAAGTATTAG CAGCTGTTTC TACGGATGGA
CGTTTTAAAG CAAGATTACC GGCAGGTCAA GGTGAGGTGA AATCACCTTC TTGGTCACCG
TTTCTCTAA
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| Protein sequence | MKILAKWLAL AVLLCTTPAK AALDIVITEG VDAARPIAVM PFVWQGPGAA PQAIADVVMS
DLVRSGTFKP LDELGLPQRN IGTVAQFQAN SWSSVGAEAL VLGTVKPYGT DQYLVSFDLI
DLVKAQNQAL KGPVSATEFL MDSRQTVISA AQFRQYGHRI SDIVYEKLTG IRGAFLTRIS
YVVVNHTQKA PYQLMVADYD GVNEQMLLRS PEPLMSPTWS PDGRRLAYVS FENKKAEIFV
QDLYTQVRTK VSSFPGINGA PAFSPDGKSL AITLSKDGQP EIYIIDIATK AIKRITNHYA
IDTEPSWYPD GKSLIFTSER GGRPQIYRVE LSSGKVSRET FEGEWNLGGS ITPDGRSMIF
VNRTNGKFNI ARMDLSTRFM QVLTSTRLDE SPSVAPNGTM VIYGTTYQGK QVLAAVSTDG
RFKARLPAGQ GEVKSPSWSP FL
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