Gene Sbal195_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1779 
Symbol 
ID5753515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2132517 
End bp2133386 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID641288053 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001554210 
Protein GI160874894 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000149804 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAA AACTGATATT AGTATCAATT TTATGCGTTC CAGCAACTGC AATGGCAGAG 
TTGCGCCATT ATGTCGCCTC TTTAAGTGAT TCCCAATGGC GAGTGAGTGA GAATTCTCCC
ATCGTTTGTC GCCTCGAGCA TGATATCCCC TCCTACGGTA AAGCAATTTT TACCAGCGAA
GCGGGTAAGC AGCAGAATAT GAATTTTACC TTAGACATGT GGGTAAAACC GGACCAAGTC
ACGCAAGCTA AGTTAATTAG TCGCGCGCCG CAGTGGCGGC CGGGAGTGGT CTCAAAAGAA
ATCACTTCAC TGCATTATCA AAAGTACTTT AATGGTGAGG TGCCTAAACG TGCCGCTTGG
TCTATGTTGG CTGAGTTGAG TCGCGGTATG GAACCGACGT TTTACTATGC TGATTGGTAT
AATGAGTCAA ATAAGATCGC TGTGGGTTTG TCATCGGTTA ATTTTGGCCG TAAATACAGC
GAGTTCAAAG CTTGTCTAGC GCACCTGTTG CCCTATAGCT TTGAAGATAT CGCATTTACT
GTGCTGAACT ATGATGAAGG CGGAACCGAT TTAACTCGTT TCTCCCAGCA GCAACTGTCT
CGGGTTCAAG AATACTTAGC CTATGATCCT TTGGTGGAGT TAGTGCTGGT GGATGCGTAT
ACCGACAGTT ATGGTGGCCG TTCAGTTAAC CAAAAAGTCT CGGATAAACG GGCGGAGTCG
GTAAAAGATT TCTTTGTTGC CAGCGGTATT CCGCAAGATC GTATCGTTAC TGTGGGGCAT
GGTGAGCGCC GTCATGTGGC TTCGAACGAT GATATGGACG AAAGGGCACG TAACCGCCGC
GTTGTGATAC GGATCAGTAA GCCTTTGTAG
 
Protein sequence
MWRKLILVSI LCVPATAMAE LRHYVASLSD SQWRVSENSP IVCRLEHDIP SYGKAIFTSE 
AGKQQNMNFT LDMWVKPDQV TQAKLISRAP QWRPGVVSKE ITSLHYQKYF NGEVPKRAAW
SMLAELSRGM EPTFYYADWY NESNKIAVGL SSVNFGRKYS EFKACLAHLL PYSFEDIAFT
VLNYDEGGTD LTRFSQQQLS RVQEYLAYDP LVELVLVDAY TDSYGGRSVN QKVSDKRAES
VKDFFVASGI PQDRIVTVGH GERRHVASND DMDERARNRR VVIRISKPL