| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1776 |
|---|
| Symbol | |
|---|
| ID | 5753512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2129290 |
|---|
| End bp | 2130609 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641288050 |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_001554207 |
|---|
| Protein GI | 160874891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2056] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000109905 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAG TCGTTATTGC AGTGTGCTTA ATGTTGGCAC TCAGTTTAGC TAGGGTGAAT
GTAGTTATCG CCCTCACCGT GAGCGCCCTT GTGGCGGGAC TTGTGGGCGG AATGGATCTG
CACCAAACCA TAGATGCCTT TAATACGGGC TTAGGTGGCG GCGCGCAAAT TGCGCTCAGT
TATGCATTAT TAGGTGCCTT CGCTGTCGCA CTATCGCACT CAGGCTTAAC CACGCTGATC
TCAAGAAGCA TCATCAGTAG TCTTGGGCAA GATCCTAATC CCACCAACAC TAACTGGGTT
CGCTGGTTAC TGCTGTTATC GCTACTTGTC ATGTCGATGG CCTCGCAGAA TATTTTACCT
ATTCATATCG CCTTCATTCC GATTTTAGTG CCACCACTGT TACATGTGAT GACCAAGCTG
AATATCGACC GTCGTTTAGT TGCTTGTGTT TTGACCTTCG GTCTGGTCAC AACCTATATG
ATTTTACCGA TTGGATTTGG TGGCATTTTC TTAAATGACA TTCTGCTTTC CAACTTAACC
AGTAATGGCT TAGCGGCTGT ACGTGAGCAA ATTCCACCAG CCATGTTAAT TCCAGCGGCG
GGCATGATAG TCGGGTTACT GACAGCTGTG TTTATCAGTT ACCGTAAACC TAGGATCTAC
GATGAGGCCA AAGTATTGGT TGCAGAGCCA GAAGAAACCC TCAATAAACG CAATATTATC
ATTGCCGCAG TGGCGATATT AGCCACCTTA GTGGTGCAAC TTGAAACCGA TTCGATGATT
TTCGGCGCCT TAGTCGGCTT CATGATTTTC AGTTTCTCGG GCGCCTTAAA GCATGTCGCC
GACCAAGATA TTTTCAATCA AGGCGTGCGC ATGATGGCCA ACATCGGCTT TATCATGATT
TCTGCCGCAG GTTTTGCCGC AGTAGTGAAA GAAACCGGTG AAGTGGGCAC GCTTGTGGCT
TCGCTTAGCG ACATCATTGG TGATAATAAA GCCCTCGCCG CCTTCTTGAT GCTGCTAGTA
GGTCTACTGA TCACTATGGG GATCGGCTCG TCTTTCTCCA CCATTCCGAT TATCGCGACC
ATTTATGTGC CATTGGCGTT AAGTTTTGGT TTTTCAGTGG CGGCGACAAT CGCGTTAGTC
GGCACCGCCG CAGCGCTGGG TGATGCGGGC TCGCCAGCAT CGGATTCCAC CTTAGGTCCT
ACTGCGGGTT TGAATGCCGA TGGTCAACAC GACCACATTC GTGACAGCGT GATCCCCACC
TTCATCCACT ACAATATTCC ACTGTTAGTG TTTGGCTGGA TTGCGGCCAT GGTGTTGTAA
|
|---|
| Protein sequence | MNAVVIAVCL MLALSLARVN VVIALTVSAL VAGLVGGMDL HQTIDAFNTG LGGGAQIALS
YALLGAFAVA LSHSGLTTLI SRSIISSLGQ DPNPTNTNWV RWLLLLSLLV MSMASQNILP
IHIAFIPILV PPLLHVMTKL NIDRRLVACV LTFGLVTTYM ILPIGFGGIF LNDILLSNLT
SNGLAAVREQ IPPAMLIPAA GMIVGLLTAV FISYRKPRIY DEAKVLVAEP EETLNKRNII
IAAVAILATL VVQLETDSMI FGALVGFMIF SFSGALKHVA DQDIFNQGVR MMANIGFIMI
SAAGFAAVVK ETGEVGTLVA SLSDIIGDNK ALAAFLMLLV GLLITMGIGS SFSTIPIIAT
IYVPLALSFG FSVAATIALV GTAAALGDAG SPASDSTLGP TAGLNADGQH DHIRDSVIPT
FIHYNIPLLV FGWIAAMVL
|
|---|
| |