Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1706 |
Symbol | lpxK |
ID | 5753442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2054416 |
End bp | 2055435 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287982 |
Product | tetraacyldisaccharide 4'-kinase |
Protein accession | YP_001554139 |
Protein GI | 160874823 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.944594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.56744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCT TAGTGAATAA AATTTGGTAT CAGGGTCATC CACTGCGATG GCTCTTGTTA CCTTTATCTT GGCTATTCGC GGTTATCACT TATGTGCGCC GCGCCTTGTT TCGCCTCGGG ATCAAATCAC AAACGGCAAT GCCTGTGCCT GTCATCGTTG TCGGTAATAT TACCGTCGGC GGCAGCGGTA AGACGCCAAC CGTGATTTAT CTGATTGAGC TACTGCGCCA GCATGGGTTT ACACCCGGCG TGATCAGTCG AGGTTACGGC GTTGATATTC AAGGTGTTAG AACGGTTAAT TTAGGGGCGA GTGCAGTTGA GGTCGGTGAT GAACCGGCCA TGATAGTGGC GCGCACTCAA GTGCCTATGG TAGTTGGCGC TAAACGCGTC GATGCGGCCA ATGCGCTTAT TGCCGAGTTT GGTGTCGATG TTATCATCTG CGACGATGGA CTGCAGCACT ATGCGCTGGG GCGCGATATC GAGCTGGTGG TGATTGATGG TCAACGCGGT TTAGGCAATG GCTTGTTGTT ACCGGCAGGT CCGCTGCGTG AAGGCGCGTG GCGTCTCGAT GCCGTGGATT TTATCGTCAA TAATGGTGGC CCAGCAGCAA AAGGGCAGTT CGAAATGCAA CTGGCCCCTA CTGAAGTGAA ACCCGTTAAA TGCGATTTGA CCTCAGGTGA GTACAGTTTC GATAAATCTC AGCCGCTGGT TGCGATGGCG GGTATTGGTA ACCCTGCGCG TTTCTTTGAA TCGCTGCGCG CTCAAGGTTA TCAACTGGCG CTATGTCAGG GGTTTGATGA TCATCAGCCC TACGATAAAA CCCAATTACG TGATTTAGCC CAAGACTTGC CGCTATTGAT GACAGAAAAA GATGCGGTTA AATGTCGCGA TTTTGCACAA GAGAACTGGT GGTATTTGGC GGTCAATGCC AAGCTATCCC CACAATTTGA TGAGCAGCTG CTCGCGCGTC TTCGCGAGGT GGCTGCAGCT AAACAAGGAA ACTTCCATGG CATTCGATAA
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Protein sequence | MQALVNKIWY QGHPLRWLLL PLSWLFAVIT YVRRALFRLG IKSQTAMPVP VIVVGNITVG GSGKTPTVIY LIELLRQHGF TPGVISRGYG VDIQGVRTVN LGASAVEVGD EPAMIVARTQ VPMVVGAKRV DAANALIAEF GVDVIICDDG LQHYALGRDI ELVVIDGQRG LGNGLLLPAG PLREGAWRLD AVDFIVNNGG PAAKGQFEMQ LAPTEVKPVK CDLTSGEYSF DKSQPLVAMA GIGNPARFFE SLRAQGYQLA LCQGFDDHQP YDKTQLRDLA QDLPLLMTEK DAVKCRDFAQ ENWWYLAVNA KLSPQFDEQL LARLREVAAA KQGNFHGIR
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