| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1705 |
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| Symbol | |
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| ID | 5753441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2052607 |
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| End bp | 2054415 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641287981 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_001554138 |
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| Protein GI | 160874822 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.433379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.881057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAT CTCCTAAAGA CGAAATGTGG ACAGTTTTCA AACGATTACT GGGATATATA
AAACAGATGA AAGGCATGTT TATGCTTTCA GTTGCGGGAT TAATTATTTA TGGTCTCGTC
GATGCCGCCT TTATCGCTTT CATCGGCCCC TTTATTGATA AGGGTTTTTC CGGCGGCGCA
CCCGCTGCGG TCACCAATGG CATAGCATTG CCAACCAGTG AAGGTTTCCA CGCGAATAAC
GACGTGCTAA TGATGGCGCC GCTTGTGGTT ATCGTCATGT TTTCCCTGCG CGGTTTTGCC
AACTTTGTCT CGACCTACGG CATTTCATAC ATGAGTGCGC GTTTGATCAT GGACATGCGT
CAGCAAGTGT TTGAGCATTA TCTGAGTCTG CCTGTCAGTT ACATGGACAA GGAAAATACC
GGTAACTTGA TTTCAAAAGT CACCTTCGAT ACTGAGCAAA TCGCCAGAGC ATCGGGTAGC
GCTTTGATTT CTATCGTCCG CGACAGTGTG ACAGTGTTTG GTATGCTGGC GCTGATGTTC
TATAACTCTT GGAAGTTATC CCTGTGTATC TTAGTGATCG GGCCGATTAT GGGCATGGTC
ATTGCTGTGG TCAGCCGTCG TTTCCGTAAG GTTTCTAAGC AAATTCAAAC CGCCATGGGC
GGCGTGAGTG CCACGACTGA GCAAATGATT AAGGGCCATA AAAACGTATT GGCCTTTGGT
GGACAAGAAA CCGAAGCCAC CCGTTTTGCT AAAGTGAACG ATCAAAACCG CCATCAAAAT
ATGAAGTTAG CTGTGGCGCA AGCCATTAGC CAACCGTTGA TCATGATTAT CGGCTCATTC
GCCTTAGCCT TTGTGCTTTA TGCGGCAAGT TTAGACAGCA TGAAAGCTGA TCTCACCGCC
GGTACCTTCG CGACAATTCT TGGCGCTATG ATGGCCATGT TGCAACCCAT TAAAAACTTA
ACCCGAGTGA ACGCCGAATT CCAACGGGGT ATTGCAGCTT GTACCACAGT GTTTGAATTA
CTGGATACGC TGCCAGAATC CGACACCGGC ACTTATACCG TTGAGCGCGC TAAGGGTCAT
TTACGTTTCG ATAAGGTCTG TTTTACCTAT GACAGCCAAG ACCGCCGAGC GCTAGAAGAT
GTTGATTTTG AAGTTAAACC CGGGCAAACC TTAGCACTAG TCGGCCGTTC TGGTTCAGGC
AAGTCGACTA TCGCCAGTCT AGTGACACGT TTTTATACGG GGCTCGAATC CGGCGATATT
CTGCTTGATG ATGTCAGCAT TTACGATTAC TCGCTAAAAT CGCTGCGTAA TCAAGTGGCT
CTGGTATCGC AGCAGGTGAC CTTATTCAAC GATACGATTG CTAACAACAT CGCCTACGCC
TATCCGGGTG AAGCGACGCG TGAGCAGATT ATTGAAGCGG CGACCTTAGC CTATGCGATG
GAGTTTATTG ACCAGTTGCC CCAAGGCCTT GATACCCAAG TAGGGGAAAA TGGCGTGTTA
TTGTCCGGTG GCCAAAGACA GCGGATTGCG ATTGCGCGCG CTATGTTGCG TGATGCGCCT
GTATTGATCC TCGATGAAGC GACCTCTGCG CTGGATACTG AGTCAGAAAA AGCGATTCAG
AAAGGCTTAG ACAACCTCAG ACAAAACCGT ACCTCAGTAG TGATCGCCCA CAGGTTGTCG
ACTATCGAGA GTGCCGATCA AATTTTAGTG GTGGATCAGG GACGTATCGT CGAGCGCGGG
ACGCACCAAT CACTATTGGA ATTAAATGGC ATGTACGCCA AATTGTACCA AATGCAATTC
GGTAGCTAG
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| Protein sequence | MTTSPKDEMW TVFKRLLGYI KQMKGMFMLS VAGLIIYGLV DAAFIAFIGP FIDKGFSGGA
PAAVTNGIAL PTSEGFHANN DVLMMAPLVV IVMFSLRGFA NFVSTYGISY MSARLIMDMR
QQVFEHYLSL PVSYMDKENT GNLISKVTFD TEQIARASGS ALISIVRDSV TVFGMLALMF
YNSWKLSLCI LVIGPIMGMV IAVVSRRFRK VSKQIQTAMG GVSATTEQMI KGHKNVLAFG
GQETEATRFA KVNDQNRHQN MKLAVAQAIS QPLIMIIGSF ALAFVLYAAS LDSMKADLTA
GTFATILGAM MAMLQPIKNL TRVNAEFQRG IAACTTVFEL LDTLPESDTG TYTVERAKGH
LRFDKVCFTY DSQDRRALED VDFEVKPGQT LALVGRSGSG KSTIASLVTR FYTGLESGDI
LLDDVSIYDY SLKSLRNQVA LVSQQVTLFN DTIANNIAYA YPGEATREQI IEAATLAYAM
EFIDQLPQGL DTQVGENGVL LSGGQRQRIA IARAMLRDAP VLILDEATSA LDTESEKAIQ
KGLDNLRQNR TSVVIAHRLS TIESADQILV VDQGRIVERG THQSLLELNG MYAKLYQMQF
GS
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