Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1676 |
Symbol | |
ID | 5753412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2021559 |
End bp | 2022704 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287952 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_001554109 |
Protein GI | 160874793 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.106727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.4425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA TCCACACCTC GGACTGGCAC ATAGGTCGTC AGTTACACAA TCAGTCATTA CTGGATGATC AAGCCTTTGT GCTCGAGCAA ATTATTGCAT TAGCAGATGA GCATAAGGTG GATGCTGTGA TTGTGGCGGG TGATATTTAT GACAGATCGA TTCCGCCAGC AAACGCGGTT GCGTTGTTAG ATGATGTGCT CAACCGCTTA GTACAAGATT TAGGCCTGCA AGTGATTATG ATTGCCGGTA ACCACGATGG CCACGAGCGC TTAGGGTTTG CGGCAAAACA AATGGCGGCA AGTGGGTTAC ATATTATTGG ACCTTTGAGT GCTGACATTC ATCCTATTAC TTTGTCGAGT TCAAGCGGTG ATGTGGTTTT TTATCCCTTG CCTTACGCTG AACCTGCAAC AGTTCGCCAA GTGTTTGAGT GTGAGGCATC GAGTCACGAA ATGGCCATGG ATGTGTTGCT GGAAAAAGTG CGCCAGCACG ATAGCCAAGG CTTACCCAAA GTGGTGATCA GCCATTGCTT TTTGGATGGT GGCAGCGAAT CTGAATCAGA GCGGCCGCTC AGTATTGGTG GCGCCGATAA AATATCGCCA AAGCTCTTTA CTGAGTTTGA TTATGTCGCC CTTGGGCATT TGCACGGACC GCAATACAAA GGCGCCGAGC ATGTACGCTA CTCAGGCTCG ATTTTGAAGT ATTCCTTTAG CGAACAACAT CAACACAAGT CGGTGACCTT AGTCGAACTG AGCACGCAAA CGCCGATTGA TATCCGTTTA TTGCCGTTAA CGTCGATGCG TGATGTTCGC ATCTTAGAAG GGGAGTTAGA CACTTTACTC GCCCAAGGTA AAATGGATGC AAAGCGTGAG GATTACCTCA TGGTCAGGCT CCTCGATAAA CATGCCATTT TAGACGCCAT GGGCAAACTT AGAGCCGTCT ACCCTAATGT GCTGCATTTA GAGCGGACAG GCTTGATGGC GGGGCAGCAG CAAGTTGCTT TGAGCCGGGA CCATATCAAA AAAGGCGAGA TGGACATGTT TTGTGACTTT TTCTCCCAGG TGTCTGGCGA GTCATTGACG CAGGCACAGC AAGCCGTGAT GGATGACCTC CTGACTAAGC TGCACAATGA GGAGCGCCAA GCATGA
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Protein sequence | MKFIHTSDWH IGRQLHNQSL LDDQAFVLEQ IIALADEHKV DAVIVAGDIY DRSIPPANAV ALLDDVLNRL VQDLGLQVIM IAGNHDGHER LGFAAKQMAA SGLHIIGPLS ADIHPITLSS SSGDVVFYPL PYAEPATVRQ VFECEASSHE MAMDVLLEKV RQHDSQGLPK VVISHCFLDG GSESESERPL SIGGADKISP KLFTEFDYVA LGHLHGPQYK GAEHVRYSGS ILKYSFSEQH QHKSVTLVEL STQTPIDIRL LPLTSMRDVR ILEGELDTLL AQGKMDAKRE DYLMVRLLDK HAILDAMGKL RAVYPNVLHL ERTGLMAGQQ QVALSRDHIK KGEMDMFCDF FSQVSGESLT QAQQAVMDDL LTKLHNEERQ A
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