| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1664 |
|---|
| Symbol | |
|---|
| ID | 5753400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2012070 |
|---|
| End bp | 2012597 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641287940 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_001554097 |
|---|
| Protein GI | 160874781 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0648284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.131005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTAT ACCTGATGGA CATTTGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC
GACGTCCTCT GGCTTGTAGC GGGTGTTCTG TTCTTAATGT GGGTATTGAT GCTTGAGCGT
TATTGGTATC TTAATTGGAT ATCACCAAAG CAACATAAAG CAATCATAGC TGCATGGGAC
GCCAGAGAGG AAACGACCTC TTGGTATGCA CACCGCATCC GTGAAGCTTG GATGTCCCAA
GCGAAGCAAG ATTTGAATGC ACGTATGCTG ATTATTAAAA CCTTAGTGGC AATTTGTCCA
ATGATAGGTT TGTTAGGTAC CGTAACAGGT ATGATTTCAG TGTTCGATGT GATGGCAGTT
CAGGGGACGA GTAATGCTCG TTTGATGGCG GCTGGTATTT CTATGGCGAC TATGCCTACG
ATGGCAGGTA TGGTTGCAGC ATTATCGGGA GTATTCTTCA GTACTCGCCT CGATGCCAAA
ATGAAAATCA GTTTAGAAAA GCTAAAAGAC AGCATGCCGC ACCACTAG
|
|---|
| Protein sequence | MTLYLMDIWD SVRGFMASGG DVLWLVAGVL FLMWVLMLER YWYLNWISPK QHKAIIAAWD
AREETTSWYA HRIREAWMSQ AKQDLNARML IIKTLVAICP MIGLLGTVTG MISVFDVMAV
QGTSNARLMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISLEKLKD SMPHH
|
|---|
| |