| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1648 |
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| Symbol | |
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| ID | 5753384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1989269 |
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| End bp | 1990177 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641287924 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001554081 |
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| Protein GI | 160874765 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.265493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTCTGA TCCCACTGGT TTATCACGCC AGCTATTCCA AGCTGGCGCT TCCTCCTCAT
CACAGATTTC CCACGACCAA GTACGCGAAT TTACGGCAGT ACTTACTCGA GAATCAGCTT
GCCACACCAG CCCAGTTCCA CACGCCAACG GCGATGACAG CGCAGGATGT AATGCAAGTG
CATCAACGCG AGTACGTAGA GCAGTTTATC GCGGGCACTT TGCCAACAGC GGCGCTTAGA
CGGATTGGTT TTCCGTGGAG TGAAGCCTTA GTTGAGCGCA CCTTGCATTC TGTGGCAGGC
ACCACTCTCA CAGCTTCATT GGCCATTAAT CAGGGTATTG GCCTGCACCT AACGGGTGGC
TATCATCACG CCCATTACGA TTTTGGCAGT GGCTATTGTA TTTTCAACGA TCTTATCCTC
GCGGCCCAAA ATGCCATCGC GAGCCAGCAA GTGCACAAGG TACTGATTTT TGATTGCGAT
GTGCATCAAG GTGACGGTAG TGCAACACTC AGCCAGCGAC ATCAAGGGAT AATCAGTTGC
TCGATTCACT GCAAAGAGAA CTTCCCGAGT CGTAAGCAGC ATTCCCACCA TGATATTGAG
CTAACCAAAG GCAGCGATGA CAATCTGTAT CTCGAAACCG TGGAGCAAAC ACTCGCCCTG
CTCATTCGCA TCCATCAGCC AGATCTCATT CTTTATGATG CTGGGGTCGA TATCCATCAA
AATGATGATC TCGGCTTGCT CAATATCAGT CAAGAAGGGC TGTTCAGACG GGATTTAACT
GTGTTATCAA TGGCAAAATC GGAAAATATT CCAATTGCTG CCGTGATAGG CGGCGGCTAC
AGCAGAGACG CACTACAATT AAGCCAAAGA CACAGCCAAC TTTTTATTGC GGCAAACCAT
TTGTGGTAG
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| Protein sequence | MTLIPLVYHA SYSKLALPPH HRFPTTKYAN LRQYLLENQL ATPAQFHTPT AMTAQDVMQV
HQREYVEQFI AGTLPTAALR RIGFPWSEAL VERTLHSVAG TTLTASLAIN QGIGLHLTGG
YHHAHYDFGS GYCIFNDLIL AAQNAIASQQ VHKVLIFDCD VHQGDGSATL SQRHQGIISC
SIHCKENFPS RKQHSHHDIE LTKGSDDNLY LETVEQTLAL LIRIHQPDLI LYDAGVDIHQ
NDDLGLLNIS QEGLFRRDLT VLSMAKSENI PIAAVIGGGY SRDALQLSQR HSQLFIAANH
LW
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