Gene Sbal195_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1642 
Symbol 
ID5753377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1983034 
End bp1983420 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content46% 
IMG OID641287917 
Productphage shock protein C, PspC 
Protein accessionYP_001554075 
Protein GI160874759 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID[TIGR02978] phage shock protein C 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.694655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.946116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGAT CTAATGGCCG TACTTTGTAC CGCATTCCCC AGTCAGGCAA AATAGCGGGT 
GTATGTGCAG GGATTGCCGA GTACTTTGCG ATTGAAACTT GGTTAGTGCG GGTACTGGCG
GTGTCTATCT TCTTACTCGG CGGCTCAGGT GTTGTGTTTA TCATCTATGT CGCTTTGTGG
GTGATTTTAG ACATCAAGCC GCAAAAGCAT TACGATAGAG ACGATATCGA GGTGAAGAAG
AAGCCGTGGC AGTCGGGAGA ACCCGCAAAG CAAGCGCTGA GCGACGTGAG TCGTCAATTT
CGAAGCCTAG AAGTTAGGCT ACAAAATTTA GAACGTCACG TCACCTCTGA CAACTTTGAT
TTAAAAAGAC AAATCAATAG TTTGTAA
 
Protein sequence
MRGSNGRTLY RIPQSGKIAG VCAGIAEYFA IETWLVRVLA VSIFLLGGSG VVFIIYVALW 
VILDIKPQKH YDRDDIEVKK KPWQSGEPAK QALSDVSRQF RSLEVRLQNL ERHVTSDNFD
LKRQINSL