Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1640 |
Symbol | |
ID | 5753375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1982107 |
End bp | 1982790 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641287915 |
Product | phage shock protein A, PspA |
Protein accession | YP_001554073 |
Protein GI | 160874757 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.695395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATTT TCTCTCGTTT CGCCGATATC ATTAACTCTA ATATCAGCGC ATTGCTGGAT AAAGCCGAAG ACCCAGAAAA AATGGTTCGA CTGATTATCC AAGAAATGGA AGACACACTC GTTGAAGTGC GTTCTACCTC AGCTAAAGTG TTAGCTGAAA AGAAAGAGCT GCAACGTCGT ATCAACCGCG TGTTAGAGCA AGTGCAAGAT TGGCAGGATA AGGCTGAACT GGCACTGTCC AAAGACCGTG AAGACTTAGC GAAAGCCGCT TTAGTTGAAA AACAAAAAGC GACCAGTTTA GCAGACACGC TAAATCAAGA GTTAGCCGTT ATCGATGAAC ATATCGCACG CTTGAAAGAT GAAGTGGGCA TGTTACAAGA AAAGCTGCTC GATGCAAAAG CGCGCCAAAA GACTATTATT TTGCGCACTC AAACAGCGTC ATCACGCTTA GAAGTGAAAA AGCAGTTAGA TTCAAGCAAG ATCGACAACG CTATGCTCAA GTTTGAGCAA TATGAGCGCC GCGTCGAAGG CTTAGAAGCC CAAGTTGAAT CTTACGATCT TGGCAGCAAA AAAACCTTAG CCGATGAGTT TGCGGCGCTA GAAGCGGAAG ATTCTGTGAA TGCAGAACTG GCAGCGCTAA AAGCCAAGGT AAAAGGTAAA GCGCCAACTA AGTCAAAAGA ATAA
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Protein sequence | MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELQRR INRVLEQVQD WQDKAELALS KDREDLAKAA LVEKQKATSL ADTLNQELAV IDEHIARLKD EVGMLQEKLL DAKARQKTII LRTQTASSRL EVKKQLDSSK IDNAMLKFEQ YERRVEGLEA QVESYDLGSK KTLADEFAAL EAEDSVNAEL AALKAKVKGK APTKSKE
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