Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1637 |
Symbol | |
ID | 5753372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1978112 |
End bp | 1979143 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287912 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001554070 |
Protein GI | 160874754 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.521274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAAT ACCTACTGCG CCGCCTCAAT TTGTTCCTTG CCACCTCGTT AGTCATGGTG GGTGTCTTAT TTTACGCCAC GGGCTTATTT CCGGTAGATC GCACCCACGC ACTCACCGGC ATACATACAC CGACGGCGAG TCAACTGGTT CAAATCGAGC AGGACTACAA ATTAGATAAA AACCAAGCGT GGCAATTTAT CGCTTATCTA CAACAAAGGC TTAGTGGTAA TTTAGGCATT TCAGTCACCT CACATCAAGA AGTGGCTGAA GAACTCAGCG CCGTCCTACC CGCCTCCTTC GAACTTGCTG TGATGGCGGC CATTATCGCG ATTTGCTTTG GTGTGCCCTT AGGCGTGCTT GCTTCCCAGA GCCAACATAA GCTCACCCAA AATACCATTA TGGCGATCAC GCTAACGGGC TACTCTGTGC CCGTGTTCTG GTTAGGTCTT TATCTTTCGC TCTGGTTTGG TGTCGATCTC GGTTGGTTAC CGATTTCTGG CCAAATCAAT TTGTTATATG AAATCAAACC TGTCACTGGC TTTATGTTGG TAGATACCCT GTTGTCAGAG TCTGAATACG GCATGTCGGC ATTTAAAGAT GCGCTGCTGC ACATCATTTT GCCTGCCACG ACACTGGCCG TGTTACCTTT TACTGTGGTG GTTCGCAGCA CGCGATCGGC GATGATGAAT GTGATGAATC AAACCTTTAT CCGCGCCGCC GAAGCCAGAG GAATGCATAC CGGGACTATT ATACTGCGCC ACGCCCTACC TAACGCCTTG ATCCCCGTGC TGAAACATTT AGGGTTAATG CTAGGTTCCT TTGCCAGTTA TGCCATAGTG GTCGAAATGA TTTTCTCTTG GCCTGGCGTG GGGTCTTGGC TGGTGTCAGG GATTTACCAA CGGGACTACA CTGTCATCCA AGGTGGTATT TTGGCCGTAG CCCTATTAAT TATCTTCCTA AGTATCTTGA TTGAAGTGCT GCATACAGTC TTTAATCCAC TGAGCAGAAA AGACCTTTAT GCCACCAGTT AA
|
Protein sequence | MFKYLLRRLN LFLATSLVMV GVLFYATGLF PVDRTHALTG IHTPTASQLV QIEQDYKLDK NQAWQFIAYL QQRLSGNLGI SVTSHQEVAE ELSAVLPASF ELAVMAAIIA ICFGVPLGVL ASQSQHKLTQ NTIMAITLTG YSVPVFWLGL YLSLWFGVDL GWLPISGQIN LLYEIKPVTG FMLVDTLLSE SEYGMSAFKD ALLHIILPAT TLAVLPFTVV VRSTRSAMMN VMNQTFIRAA EARGMHTGTI ILRHALPNAL IPVLKHLGLM LGSFASYAIV VEMIFSWPGV GSWLVSGIYQ RDYTVIQGGI LAVALLIIFL SILIEVLHTV FNPLSRKDLY ATS
|
| |