Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1635 |
Symbol | |
ID | 5753370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1976224 |
End bp | 1977231 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287910 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001554068 |
Protein GI | 160874752 |
COG category | [V] Defense mechanisms |
COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.76402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTAC TCGACGTACG AAATCTCACG ATTGAACTCG ATACGCCCCA CGGTAGAGTG CGGGCGCTCG AAAAAGTCAG CTTAACGCTC AATGCCGGCG AAATTCATGG CCTAGTCGGT GAGTCAGGCT CTGGACGAAG TTTATTAGCC AGAGCGATTC TTGGGATCCC AGGTCCCAAC TGGACCATCA CAGCCGATCG CATGATGTGG GATGGCAATA ACTTGATGGC TATGAGCTCA AAAGAGCGCC GCAATCTAAT GGGTTCAGAC ATGGCGATGA TCTTCCAAGA TCCATCGGGC AGCTTAGATC CGGCGCAAAC CGTCGGCAGT CAGCTGATGC AAGCTATGCC TAAGAATCCC AATGCCTATT TTTGGCAAAA ACGTCGACAT GCACGGCTGA CAGCGCAAAA ATGGCTGCAT AAAGTCGGGA TTAAAAATCC TCGACAGGTA ATGTCTAGCT ATGCGTGGGA ATTATCCGAA GGCGAATGCC AAAAGGTGAT GATTGCGATG GCGGTTGCTA ATCAGCCTCG CCTCTTGATT GCCGATGAAC CCACAAGCTC GATGGAGCTC AGCACTCAAG CGCAGATATT CAGATTATTA TCTCAATTAA ATCAATTACA AAATGTATCG ATTCTATTGA TCAGCCACGA GCTTGAAACC TTAGCCCAAT GGTGCGATCA CTTATCCGTG CTCTATTGCG GTCAGGTTAT GGAATCAGGG CCGACAGACG AAGTGATTAA GCAGCCTTAT CATCCTTACA CTAAGGCGCT GCTTGACAAC ATGCCCGACT ATTCAGGCTC AGGTGGCCAC AAGGCGATTA TGCCTACCCT TCCAGGGTCT GCGCCTGCCT TACAGCATTT GCCAATCGGT TGCCGCTTAG GGCCTCGTTG CCCCGAAGCC CAAAAAAAAT GCGTTAATCA GCCAAATTTA AGTCATATTA AAGACCGCTA TTTTGCCTGT CATTTCCCTT ATCACGGCGA AACCCACAAT GACGACCCCA CTGCTTAA
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Protein sequence | MPLLDVRNLT IELDTPHGRV RALEKVSLTL NAGEIHGLVG ESGSGRSLLA RAILGIPGPN WTITADRMMW DGNNLMAMSS KERRNLMGSD MAMIFQDPSG SLDPAQTVGS QLMQAMPKNP NAYFWQKRRH ARLTAQKWLH KVGIKNPRQV MSSYAWELSE GECQKVMIAM AVANQPRLLI ADEPTSSMEL STQAQIFRLL SQLNQLQNVS ILLISHELET LAQWCDHLSV LYCGQVMESG PTDEVIKQPY HPYTKALLDN MPDYSGSGGH KAIMPTLPGS APALQHLPIG CRLGPRCPEA QKKCVNQPNL SHIKDRYFAC HFPYHGETHN DDPTA
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