| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1603 |
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| Symbol | |
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| ID | 5753335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1931494 |
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| End bp | 1933143 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641287875 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001554036 |
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| Protein GI | 160874720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00702468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.288093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA AACTCCCTCG CCAAGCCACA GCATCCGAAG AAAGTCTGCT CCGCATTTTT
ACTGCACCGG AAGATGCAGG ATCAACGCTG AGTATTATCG AGCAGAAGCT CTCCGAGGAC
TTAGCAGGCT TTTTGGGTGA CAGTATCGCC GCGCTCGAAA AACCCTTGTC GGAAATTGAA
ACCGATTTTC AAGCCTTTGA GATCCCAACT CAGCCGCGTT TCGTCTCCGA TTACACCGAC
GAGATCATGC AAAATCTGGT GGCGCATTCG GTACACACAG CGGCACCAAG TTTTATCGGC
CACATGACGT CGGCACTGCC CTACTTTGTG TTGCCGCTGT CGAAAATGAT GGTGGGACTG
AATCAAAATC TGGTCAAAAT CGAAACCTCA AAGGCATTTA CGCCGCTTGA GCGCCAAGTG
CTCGGCATGA TGCACCATTT GATTTACGAC CAAGATACGG ATTTTTATCA AAGCTGGATG
CACAGTGCGA ATCATTCCCT CGGGGCATTT TGCTCCGGCG GCACAGTGGC CAACATCACC
GCCCTGTGGA TTGCCCGCAA CCAATTATTG AAAGCCGATG GCGAGTTTAA AGGCGTCAGC
CGCGAAGGTT TACTCAAGGC ACTGCGCCAC TATGGCTATG ACGATTTAGC GATTTTAGTC
TCGGAGCGCG GTCACTATTC GCTAGGCAAA GCCGTCGATC TGCTTGGTAT CGGTCGTGAC
AATATCATCA GCATTCCCAC GGGCATCGAT AACAAGGTCG ATGTCGCGAA AATGCGCCAA
GCCGCCCTTG AACTTGCCAG TAAAAACATC AAAGTGTTGG CGATTGTTGG TGTGGCTGGC
ACCACAGAAA CCGGTAATGT TGACCCATTG ACAGAATTAG CGGCGCTGGC AAAAGAGTTA
AATTGCCATT TCCATGTGGA TGCGGCGTGG GGAGGCGCGA GTTTATTATC CAATAAATAC
CGCCACTTAC TCACAGGTAT CGAACTTGCC GATTCAGTCA CCATAGATGC CCACAAACAA
ATGTACGTGC CTATGGGCGC GGGTATGGTG TTATTTAAAG ACCCAGAGTT CGCCCACGCC
ATTGCCCATC ACGCCGAATA TATTCTGCGC CGTGGTTCAA AGGACTTAGG CAGCCAAACG
CTCGAAGGTT CACGCCCCGG CATGGCGATG TTAGTGCACG CTTGCTTACA GATCATCGGC
CGCGATGGGT ATGAAATCTT AATCAATAAC AGCCTTGAAA AAGCGCGTTA TTTTGCCGAG
CAAATCAAAG CCCATAAGGA TTTTGAGCTG GTCACTGAGC CAGAACTGTG TCTGCTGACT
TATCGTTATG TCCCCGCCTG CGTCCAAGCC GCCATACAGC TTGCCTGTGA GCAAGCAGAC
ACGATAAGAG TCGCCCGCTT TAACGAGCTG CTCGATGGCC TGACACAGTT TATTCAAAAG
CACCAACGCG AACAGGGTAA ATCCTTCGTC TCCCGCACCC GCATTCAGCC AGCCCGCTAC
TTTAGGCAAG CGACCGTGGT GTTTCGCGTA GTGCTCGCTA ACCCCCTCAC CAGCCATGAC
ATCCTCAATC AAGTGCTTGT TGAGCAAAGT GAAATCGCCG CACTAGATAA TGAGTTTTTA
CCCGTACTCA TGGCGATGGT TGCTGATTAG
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| Protein sequence | MTQKLPRQAT ASEESLLRIF TAPEDAGSTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE
TDFQAFEIPT QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL
NQNLVKIETS KAFTPLERQV LGMMHHLIYD QDTDFYQSWM HSANHSLGAF CSGGTVANIT
ALWIARNQLL KADGEFKGVS REGLLKALRH YGYDDLAILV SERGHYSLGK AVDLLGIGRD
NIISIPTGID NKVDVAKMRQ AALELASKNI KVLAIVGVAG TTETGNVDPL TELAALAKEL
NCHFHVDAAW GGASLLSNKY RHLLTGIELA DSVTIDAHKQ MYVPMGAGMV LFKDPEFAHA
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE
QIKAHKDFEL VTEPELCLLT YRYVPACVQA AIQLACEQAD TIRVARFNEL LDGLTQFIQK
HQREQGKSFV SRTRIQPARY FRQATVVFRV VLANPLTSHD ILNQVLVEQS EIAALDNEFL
PVLMAMVAD
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