Gene Sbal195_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1580 
Symbol 
ID5753312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1902672 
End bp1903721 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID641287852 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001554013 
Protein GI160874697 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATT CCCGCGTATT TATTAATAGC CTGGCCTATG AACTGGCGCC TGTTGTGGTT 
TCCAGTAGTG AGCTAGAGTC TCGTCTTGCT CCTTTGTATC AAAAGTTCCG TATTCCAATG
GGACAGCTTG CCGCATTGAC TGGGATTACT GAACGCCGCT GGTGGCCAAA AGGACATCAA
TTGTCCGACG GTGCGATTAA AGCTGCCCGT AAAGCCATGG TTGAAACTGG GATTGATGTC
GCCGATTTAG GTGCTGTTGT CTATACCGGC GTGTGCCGCG ATCAACATGA GCCCGCGACT
GCGTGTCGCG TTGCTGCCGA ATTGGGCGTA TCAAAAGACA CCGCCATTTA CGATATCAGC
AACGCTTGTC TTGGGGTGTT ATCGGGTATT TTAGATATCG CTAACCGAAT TGAGTTGGGT
CAAATCAAGG CGGGCATGGT GGTGTCCTGT GAATCGGCGC GGGATATTGT CGATGTCACT
ATCGATAACA TGCTGGCCGA TCCTACTATG CAGAATTTTG CCCAGTCGCT GGCGACCTTA
ACCGGTGGCT CTGGCGCAGT GGCGGTTATC CTTACCGACG GCAGTTTGCC GCTGACAAAT
GTGCGTCAGC ATCAATTGCT GGGCGCATCG CACTTATCGG CGCCTGAGCA TCACCAGTTG
TGTCAATGGG GTCTGCAGGA AGTGGGGCAC AATCTGTACC GCGAGTTTAT GCGTACTGAT
GCGGTGACGC TTCTCAAAGA AGGCGTTGAG CTAGCTAAAC ACACTTGGGA GCATTTCCTT
GAGCAGCGTA ATTGGCTGGT TGAGCAAGTG GACAAAGTGA TCTGCCATCA AGTGGGCGCC
TCAAACCGTA AGCAAGTGCT TAGCGCGTTA AATATTCCCC CCGAGAAAGA ATTTCCTACG
TATCAGCTGC TGGGCAATAT GGGCACAGTG TCGTTACCTG TGACCGCCGC CATGGCGCAC
GATCAAGGCT TTTTACAAGT GGGCGATCAA GTGAGCTTTT TAGGCATAGG CAGTGGATTG
AATTGCATGA TGTTAGGCAT TAAGTGGTAG
 
Protein sequence
MKYSRVFINS LAYELAPVVV SSSELESRLA PLYQKFRIPM GQLAALTGIT ERRWWPKGHQ 
LSDGAIKAAR KAMVETGIDV ADLGAVVYTG VCRDQHEPAT ACRVAAELGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGMVVSC ESARDIVDVT IDNMLADPTM QNFAQSLATL
TGGSGAVAVI LTDGSLPLTN VRQHQLLGAS HLSAPEHHQL CQWGLQEVGH NLYREFMRTD
AVTLLKEGVE LAKHTWEHFL EQRNWLVEQV DKVICHQVGA SNRKQVLSAL NIPPEKEFPT
YQLLGNMGTV SLPVTAAMAH DQGFLQVGDQ VSFLGIGSGL NCMMLGIKW