Gene Sbal195_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1556 
Symbol 
ID5753288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1876160 
End bp1876969 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content45% 
IMG OID641287828 
Productintegrase catalytic region 
Protein accessionYP_001553989 
Protein GI160874673 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.580767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA GTAAGTCAGG CTATTACGAT TGGCATAAAC GCCCTGCAAA CGTGATAAGC 
CTTGAAACAC TGAAGCTTTA TCGCCTTGTT CGACAGCTAT TTAAGCAAAG TCGAGGCAGC
TTAGGGAATC GTGAAATGGT GAAGAAATTG CGCAAGGAAG GCTACCAGGT TGGTCGCTAT
CTCGTTCGTA AAATTATGCA CCGCCTTCGA CTCAAAGTAA CCCAGCGATG TGCTTACAAG
GTGACGACAC AGCGAAAACA CTCAGATGCA GTGGCTGATA ACCTGTTAAA CATGAACTTT
AATCCAGTAT CGGCTAATCA GGTCTGGGCG AGTGACGTGA CCTATTTAAA GACGGGTGAA
GGCTGGATGT ACTTAGCTGT GGTGATGGAT TTATATTCAC GCCGGATTGT GGGATGGCAC
ATAGACAAAC GCATGACCAC AGATTTGATA TCCAAGGCAT TAATAAAAGC CTACAACCTG
CGCCAACCGG CCAGAGGGTT GGTATTTCAC AGTGACCGAG GCTCGCAATA TACCAGTAAG
CAATTCGGTA GGCTGCTATC GAGCTATGGT ATCCGAGCCA GCATGGGTGA TGTGGGTGCG
TGTTGGGATA ATGCCGTTGT TGAGCGTTTC TTTGGTAGCT TGAAACACGA TTGGATTTTT
AAAGTTAATC AACCAACAAG GGAGTTTATG AAGCAAGATG TGACGGCTTA CATGAAATAT
TACAACTTGG AGCGGCTTCA TTCTGCTAAT GACGCTCTGT CACCTGTAGA GTTTGAAAAT
TCTCAACTAA AAGTGTCCAG TTTGGGTTGA
 
Protein sequence
MSVSKSGYYD WHKRPANVIS LETLKLYRLV RQLFKQSRGS LGNREMVKKL RKEGYQVGRY 
LVRKIMHRLR LKVTQRCAYK VTTQRKHSDA VADNLLNMNF NPVSANQVWA SDVTYLKTGE
GWMYLAVVMD LYSRRIVGWH IDKRMTTDLI SKALIKAYNL RQPARGLVFH SDRGSQYTSK
QFGRLLSSYG IRASMGDVGA CWDNAVVERF FGSLKHDWIF KVNQPTREFM KQDVTAYMKY
YNLERLHSAN DALSPVEFEN SQLKVSSLG