Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1551 |
Symbol | |
ID | 5753283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1869949 |
End bp | 1871070 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641287823 |
Product | ABC-2 type transporter |
Protein accession | YP_001553984 |
Protein GI | 160874668 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGTA GAATTTTTGC AATTGTCGTC AAAGAGCTGC GGCAATTATC ACGGGATCGT ATGACCTTTG GCATGATAGT CATGATCCCG CTGGTGCAAC TGATGTTGTT TGGTTATGCC ATCAATACCG ATGCGCGCCA TCTGCCCGCG GGGCTGGTAA ATTTGAGCGA TTCTGCCTAC AGCCGTTCAT TGGTGCAGGC GGTGGAAGCG ACGCAGGTGG TGGATTTCAA ACAGCGTTAT TTAAGTGCAG CTGAGGCAGA GGCGGCGATC ACTCGCGGCG AAGTTAAAGC TGTGCTGTAT TTGCCCGCCG ATCTCGATGA GCGCTTAGTG CGTCACCCAA GCTTTGCGGG TCAGCAATAT TTAGCTCAGC CAGTAGGGCA ATGGCTGGTG GACGGTTCTG ATACGGTTGT CGCCTCAACC ATTCGTAGCC TTAGGCAAAT GCCACTGGAT GAAGTCGCAG GGAGAGCGCA AAAAGCCGTG ATGCCGAGTT TTGAAGTGGT GCAATATTTT AATCCCGAGC AACGCTCTGT GGTCAATATA GTGCCCGGCC TGCTGGGCGT GATTTTGACT ATGACCATGG TGATGTTCAC CTCCGCCGCC ATAGTGCGCG AGCGCGAGCA GGGCAATATG GAGTTTTTGA TCACTACGCC AGTACGGCCG CTGGAGTTGA TGCTGGGTAA AATCGTGCCC TATGTGATCG TCGGCTTTGT GCAAGTGACC ATTATCCTGA GCGCAGGGCA TTTGTTGTTT GATGTGCCGA TTCGTGGCGG GATTGACTCC ATCGCCCTTG CCGCTATGTT GTTCATTTGC GCCAGTTTAA CCTTAGGATT AGTGATTTCG ACCATAGCTA AAACCCAGTT GCAATCGATG CAAATGACGG TATTTATCCT GCTGCCATCG ATTCTATTGT CGGGGTTTAT GTTCCCCTAC GAAGCCATGC CCATCGCGGC GCAGTGGATT GCCGAAGCCT TACCCGCAAC CCACTTTATG CGCATGTCAC GGGCCATAGT GTTGCGCGAT GCCCAAGTGA TGGATCTGCA ATTTGATGCC CTGTGGATGA TAGGTTTTAC CTGTATCGGG CTATTTATCG CCAGCATGAG ATTCTCTAAG CGCTTGGATT AG
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Protein sequence | MWRRIFAIVV KELRQLSRDR MTFGMIVMIP LVQLMLFGYA INTDARHLPA GLVNLSDSAY SRSLVQAVEA TQVVDFKQRY LSAAEAEAAI TRGEVKAVLY LPADLDERLV RHPSFAGQQY LAQPVGQWLV DGSDTVVAST IRSLRQMPLD EVAGRAQKAV MPSFEVVQYF NPEQRSVVNI VPGLLGVILT MTMVMFTSAA IVREREQGNM EFLITTPVRP LELMLGKIVP YVIVGFVQVT IILSAGHLLF DVPIRGGIDS IALAAMLFIC ASLTLGLVIS TIAKTQLQSM QMTVFILLPS ILLSGFMFPY EAMPIAAQWI AEALPATHFM RMSRAIVLRD AQVMDLQFDA LWMIGFTCIG LFIASMRFSK RLD
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