Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1510 |
Symbol | |
ID | 5753242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1821824 |
End bp | 1822798 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641287782 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001553943 |
Protein GI | 160874627 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000904227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG TATTACTCAA ACAAATCTGT GAACTCGATG TTTTTACCTT GCTGGTATTT AAAAGTATTT TCGACACAGG GCACGCAAAC AGTGCCGCCA AAGCGCTGGA TGTTTCTGCA CCAAAAATTA GCCGCTGCCT CAACGCATTA CGCCTGACCT TTAACGATGA ACTGTTTTAT CGCCGTCAAC AGGGGCTAAA ACCCACTCCC CTAGCAGAAA GCCTGTATGT GGCTATTTGC CAGTTTACCG AATCGGTTTA TCACCTCGAA CAATCTGCAA CTCAGATACA AAATGCGGCC ATCAATGCCG ATTTACCGCT GCATATCGCT GCCTGTAATG GGCTATTGAG CTTTTTAGCG CCACAATTAA GCACGCCGGA CGTCGCCCAA GCGCTAGGGC AAATACGTTT ACATAAATGG CAAGAGAATA GCGCTGAGTT AATCCACGCA GGTGCGCTGG ATTTTGGTAT TACCTTAGAA AGTGCTGAAA ATAAAGAATT AAGCTATACC AAACTGGGCT CAGTCAATGG CGTTTACATC GTTGCCGCCA AACAACATCC TCTGTGGCAG ATTGAGACCG ATATTACCTT AGAGCAAATC TGTCGCCATC CATTCCTCTA CCAAGAAGTG AAGGGCTTTA ACAGCAAAAT TGACCCCTTA GAATTGTTTT GCCAGCGCCA AGGCCTCTTG CTGCCAGCGG TGGATAAAGT CATCGACAGG GAGGAGTGGT ACGCCCATTT ACTCACCATG AAGAGTGTGG CTTTTTGTTC CAGCATTGAT ATGCACACAG TAAAACATAT GCCCGGATTA CACTTAGAAC GCCTAAGCGA TACAGAGCTC AATCGACTCC ACGATACTAT GATGGCGCCA CAATATTATC TTATTGAAAA ACCAGCCATT CATCGGCGCT ACAGCCAGAG TCAAAGCGCG CTTGTCGTAC GTTCCTTACT TGCCGCGCTC GACCCCGCAC GCTAA
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Protein sequence | MSNVLLKQIC ELDVFTLLVF KSIFDTGHAN SAAKALDVSA PKISRCLNAL RLTFNDELFY RRQQGLKPTP LAESLYVAIC QFTESVYHLE QSATQIQNAA INADLPLHIA ACNGLLSFLA PQLSTPDVAQ ALGQIRLHKW QENSAELIHA GALDFGITLE SAENKELSYT KLGSVNGVYI VAAKQHPLWQ IETDITLEQI CRHPFLYQEV KGFNSKIDPL ELFCQRQGLL LPAVDKVIDR EEWYAHLLTM KSVAFCSSID MHTVKHMPGL HLERLSDTEL NRLHDTMMAP QYYLIEKPAI HRRYSQSQSA LVVRSLLAAL DPAR
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