| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1496 |
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| Symbol | dnaE |
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| ID | 5753228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1798593 |
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| End bp | 1802066 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641287768 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001553929 |
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| Protein GI | 160874613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.86585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CTCGTTTTGT GCATCTTCGT GTCCACAGTG ACTTCTCAAT GACCGATGGC
GTGGCCAAGG TCAAGCCAAT TTTGGCGCAG GTGGAAGCGC AGGGAATGGC GGCTGTCGCC
CTGACTGACC AAAACAACTT TTGTGGTTTG GTTAAGTTTT ACAGTGGTTG CCATGGTGCG
GGGATCAAGC CGATTATCGG CGCCGATTTT TGGATGCAAG TGCCCGGATT TGAAGGCGAA
TTGTGCGCCT TGACCATAAT TGCGATGAAC AATGTTGGTT ATCAGAATCT GACCCAAATT
ATCAGTCAGG CCTATTTGCG TGGCCAAGTG GCTGGGCGTG TGGTGATCGA CCAAGAGTGG
TTACTCACTT ATAACGAAGG CATTTTGCTG TTATCAGGCG CCAAAGAGGG CGATCTGGGT
AAGGCGTTGC TCAAGGGTAA TAGCACTCAG GTTGAATCTT TATGTGAGTT TTATCAAACT
CATTTCGCCG ATCGTTATTT TCTTGAACTT ATCCGTACCG GTCGCCCCGA CGAAGAACGC
TATCTGCACA TGGCTGTAAT CTTAGCGCAG GAGAAAGGCA TTCCAGTGGT CGCCACCAAT
CAGGTGGTGT TCCTTAAACC TGAAGATTTT GACGCCCATG AAATTCGAGT CGCGATCCAC
GATGGTTTTA CCCTTGCCGA TCCGCGCCGT CCTAAAAAGT ACAGTGAACA GCAGTATTTA
CGTAGCGAAG AGGAAATGTG CGAGCTATTT GCCGACATTC CTGCGGCGCT GGCGAACAGT
GTCGAAATCG CTAAACGTTG TAACGTGACT ATTCGTTTGT ACGAGTATTT CCTGCCCAAT
TTCCCGACGG GCGATATGTC CATCGAAGAC TTTCTGGTTG ATTGTTCGAG GAAGGGCCTT
GAAGAGCGGC TCGAGTTTTT GTTCCCGAAC CCCGAAGTGC GCGCCGAGAA ACGGGGCGAA
TACGATGAGC GGCTCGATAT CGAACTCAAA GTAATCAACC AGATGGGCTT CCCCGGTTAC
TTCTTGATCG TGATGGAGTT CATCCAATGG GGTAAAGATA ACGGTATCCC AGTGGGACCC
GGTCGTGGTT CGGGTGCGGG TTCACTTGTG GCCTATGCGC TCAAAATCAC CGACTTAGAT
CCGCTCGAAT TCGACTTACT GTTCGAACGC TTCTTGAACC CTGAGCGTGT TTCCATGCCC
GACTTTGACG TCGACTTCTG CATGGATAGA CGTGATGAGG TTATTGACCA CGTGGCCGAG
CTGTACGGCC GCGAAGCGGT ATCGCAAATC ATCACCTTCG GTACTATGGC GGCAAAAGCG
GTTATCCGCG ACGTTGGCCG TGTGCTCGGT CATCCCTATG GTTTCGTTGA CCGAATTTCT
AAACTCATTC CCCCTGAACC TGGCATGACA CTGGCGAAAG CCTTTGAGGT CGAGCCAGCG
TTGCAAGAAT CCTATGATGG CGATGAAGAC GTCAAAGATC TGATCGACAT GTGCCGTAAG
CTTGAAGGTG TAACCCGTAA CGCCGGTAAG CACGCCGGTG GTGTAGTTAT TGCACCAACA
AAAATTACCG ATTTTGCACC GCTGTATTGC GATGCAGAAG GCAAAAACCC AGTAACACAA
TTCGATAAAA ACGACGTTGA AACCGCAGGG CTGGTTAAGT TCGACTTCTT GGGATTAAGA
ACCCTGACGA TTATCGACTG GGCACTGGAA ATGGTGAACA AGGTCGAAGT GAAAAACGGG
CGCGAACCAA TACGGATTGA GGCGATTTCA CTCACGGATC CCGCCTGTTT CCGTCTGCTG
CAAAAGTATG AAACTACGGC GGTATTCCAG CTCGAATCCC GTGGTATGAA GGATTTGATT
AAGCGTCTGC AGCCCGACTG TTTCGAAGAC ATGATTGCAC TGGTGGCACT ATTCCGTCCG
GGGCCGTTGC AATCGGGCAT GGTAGATAAC TTTATCGAAC GTAAGCATGG GCGCGAGGAA
GTCTCGTACC CAGATTCTCA GTATCAACAT GAATCGCTTC GTGAGCTGTT ATCGCCGACC
TACGGCATTA TTCTGTATCA AGAGCAGGTG ATGCAGATTG CGCAGGTGCT GTCGGGCTAC
ACCCTTGGCG GTGCCGACAT GCTGCGCCGT GCTATGGGTA AGAAAAAGCC CGAAGAGATG
GCCAAGCAGC GCAGTATCTT TAAAGAAGGC GCAATCAATA ACGGCGTCGA TGGCGACTTG
TCGATGAAGA TCTTCGACTT AGTGGAAAAG TTTGCCGGCT ACGGTTTTAA CAAATCTCAC
TCCGCCGCTT ATGCGCTGGT TTCCTATCAG ACCTTATGGC TTAAAACCCA TTTTCCTGCG
CAGTTTATGG CGGCGGTAAT GTCGGCCGAT ATGGATAACA CAGATAAAAT TGTGACCTTG
GTCGATGAAT GTGAACGCAT GGGCTTGCCG CTTATTCCGC CGGATGTGAA CAAAGGTTTG
TTCAAATTTA CCGTCGATGA TGATCTGCGC ATTGTTTATG GCATCGGCGC CATTAAAGGC
GTGGGTGAAG GCCCAGTTGA ATCGATTTTA GAGGCGCGTA AAGACGGCCC CTTTGTGGAT
TTATTCGATT TCTGTGCCCG CATTGATTTG AAAAAACTCA ATAAGCGCGT GATTGAAAAG
CTGATCTGCG CGGGTGCCTT AGACAATCTT GGGCCGCACC GTGCGTCAAT GATGGCCACC
TTGCCTGAAG CGATTCGCGC CGCCGATCAA CATGCTAAAG CCGAAGCGAT TGGCCAACAC
GATATGTTTG GTTTGCTCAA CAGTGAACCC GAAGACAGCA AGCAGCAGTT TGTTGAATGT
ACTCCTTGGC CGGATAAAAT TTGGCTTGAA GGCGAGCGCG AAACCTTAGG CTTGTATTTG
ACCGGTCATC CGATCAATCA ATATTTGAAA GAGCTTAAGC ATTACACGTC CGGGCGTTTG
AAAGATGTGC ATCCTACCGA GCGCGGTAAA ACAGCCAAGG CTGCGGGGTT AGTGGTGGCA
ACACGCGTGA TGTTGACCAA GCGCGGCTCG AAAATGGGTC TGTTGACGCT TGATGATAAG
AGCGCGCGGC TTGAGATCAT GTTGTTTACC GAAGCCTTTG AAAAGTTTAA TCATCTGCTG
GAAAAAGATC GTATCCTCAT TTGTGAAGGT GAGGTGAGTT ACGATGATTT TGCCGGCGGC
AACCGCATGA CGGCGCGTAA CATTATCGAC ATCAGTGAGG CGCGAAGTCA CTTTGCTAAG
GCGCTTGAAA TCGATATGGA TGGCAGTGAG TTAACGCCAT CAGCCCTCGA TACCTTCGAG
CAAGCCCTAA GCCCGTGGCG TAACGGCGCC GTGCCTGTGG TGATCAACTA CACTCAAGCC
CAAGCCAAAG GTCAATTTAG ACTCGCCGAT GCTTGGCGAG TGAATCCGAC CGATGACTTG
ATGCTCTCGC TCGAATCGCT ACTCGGGCCA AACAAGGTGA GAATTTTATT CTAA
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| Protein sequence | MSDPRFVHLR VHSDFSMTDG VAKVKPILAQ VEAQGMAAVA LTDQNNFCGL VKFYSGCHGA
GIKPIIGADF WMQVPGFEGE LCALTIIAMN NVGYQNLTQI ISQAYLRGQV AGRVVIDQEW
LLTYNEGILL LSGAKEGDLG KALLKGNSTQ VESLCEFYQT HFADRYFLEL IRTGRPDEER
YLHMAVILAQ EKGIPVVATN QVVFLKPEDF DAHEIRVAIH DGFTLADPRR PKKYSEQQYL
RSEEEMCELF ADIPAALANS VEIAKRCNVT IRLYEYFLPN FPTGDMSIED FLVDCSRKGL
EERLEFLFPN PEVRAEKRGE YDERLDIELK VINQMGFPGY FLIVMEFIQW GKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE
LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA
LQESYDGDED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DAEGKNPVTQ
FDKNDVETAG LVKFDFLGLR TLTIIDWALE MVNKVEVKNG REPIRIEAIS LTDPACFRLL
QKYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE
VSYPDSQYQH ESLRELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRSIFKEG AINNGVDGDL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHFPA
QFMAAVMSAD MDNTDKIVTL VDECERMGLP LIPPDVNKGL FKFTVDDDLR IVYGIGAIKG
VGEGPVESIL EARKDGPFVD LFDFCARIDL KKLNKRVIEK LICAGALDNL GPHRASMMAT
LPEAIRAADQ HAKAEAIGQH DMFGLLNSEP EDSKQQFVEC TPWPDKIWLE GERETLGLYL
TGHPINQYLK ELKHYTSGRL KDVHPTERGK TAKAAGLVVA TRVMLTKRGS KMGLLTLDDK
SARLEIMLFT EAFEKFNHLL EKDRILICEG EVSYDDFAGG NRMTARNIID ISEARSHFAK
ALEIDMDGSE LTPSALDTFE QALSPWRNGA VPVVINYTQA QAKGQFRLAD AWRVNPTDDL
MLSLESLLGP NKVRILF
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