Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1495 |
Symbol | rnhB |
ID | 5753227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1797842 |
End bp | 1798474 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641287767 |
Product | ribonuclease HII |
Protein accession | YP_001553928 |
Protein GI | 160874612 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0185949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACCT ATAAAAGTTT AACCGAAGCC GATTTACTGG CCTTTTCAAC CGGTTTGATT GCCGGTGTGG ATGAAGTCGG CCGCGGCCCC TTAGTCGGCG ATGTGGTCAC TGCCGCTGTG ATTTTAGATC CAAACAAGCC CATCAGTGGT CTGAATGATT CTAAAAAACT CAGTGAGAAA CGCCGCGAAG CCCTGTTCGA TGAGATTTGT GATAAAGCTT TGTGTTATCA CGTTGGCCGC GCCAGTCCTG CTGAAATTGA TGAGCTGAAT ATTCTGCACG CCACTATGTT GGCAATGCAG CGCGCGGTTG CTGGGCTTAA TATTGCCCCT GAGCTTGTAC TTGTGGATGG CAATCGTAGC CCCATCTTTG TTGCCCATAA TGGCGCAGGG CTTACCAGCC ACAGCATCAT TAAAGGTGAT GGTTTGATTG CCAGCATCAG CGCCGCTTCG ATCATCGCGA AAGTGACGCG GGATCGCGAG ATGGACGTGC TCGATGCCGC TTATCCGCAA TACGGTTTTG CAAAACATAA GGGCTATCCA ACTAAGGCGC ATTTTGAGGC CATAGCCGAA CATGGTGTGT TTGACCAATA TCGTAAAAGT TTCAAACCCG TCAAGGCATT ACTGGAACTG TAA
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Protein sequence | MATYKSLTEA DLLAFSTGLI AGVDEVGRGP LVGDVVTAAV ILDPNKPISG LNDSKKLSEK RREALFDEIC DKALCYHVGR ASPAEIDELN ILHATMLAMQ RAVAGLNIAP ELVLVDGNRS PIFVAHNGAG LTSHSIIKGD GLIASISAAS IIAKVTRDRE MDVLDAAYPQ YGFAKHKGYP TKAHFEAIAE HGVFDQYRKS FKPVKALLEL
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