| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1487 |
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| Symbol | |
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| ID | 5753219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1788477 |
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| End bp | 1789667 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641287759 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001553920 |
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| Protein GI | 160874604 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0133768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA TGGTGATTTT GGGTGCTACC GGCTCTATAG GTGCCAGTAC CTTAAGTGTG
ATCTCGGCTA ATCCATTTGC TTATAGCGTG TATGGATTAG TGGCCAACGC GAGCGTTGAT
AAGATGCTTG CACTCTGTGT GGCCCATAAA CCGAAAGTGG CGCATATGGT GGATGAAGCG
GCAGCAAAAC AGTTGCGTGC CGTTTTACCT GCGACGCTCA ATATCCAAGT CACCACTGGC
ATGAACGATT TACTCGGTTT AGTGACCGCT GCCGAAGTGG ATACTGTGAT GGCGGCGATT
GTAGGGGCTG CAGGGCTAGT ACCGACGCTT GAAGCCGTAA AGGCGGGTAA GCGGGTATTA
CTGGCCAACA AAGAAGCCTT AGTCATGTCA GGTGAGCTGT TTATTGAGGC GACTAAGCGC
TCTGGCGCAG TGCTCTTGCC TGTGGACAGT GAGCATAATG CCATCTTCCA ATGTCTTCCC
CAGGAAGTGC AAGCCAATCT TGGCCGTTGT GACTTAGCGG CATCGGGTAT TTCCCATATT
CTGTTAACCG GTTCTGGCGG ACCTTTCCTG CGGTCGGATT TGGCGACACT GGCCGCCATG
ACGCCTGCCC AAGCCTGTAA ACATCCTAAT TGGTCCATGG GACCTAAAAT CTCCGTCGAC
TCCGCCACTA TGATGAATAA GGGCTTAGAG TTTATTGAGG CGCGTTGGTT GTTTAACACT
CAGGCTGAGC AACTGAAGGT GGTTATCCAT CCGCAAAGCG TGATCCACTC AATGGTGCAG
TACCGTGATG GCTCCGTTAT TGCCCAAATG GGTAACCCAG ATATGCGTAC GCCTATTGCC
CATTGCATGG CTTATCCGCA AAGAATTCAT TCTGGCGTTG AACCTTTAGA TTTTTTCAAA
GTCGGACAGT TAAGCTTTTA TGAACCTGAT TTTGAACGTT TCCCCTGCTT GGCTTTGGCA
ATGGAAGCCT GTGCCCAAGG CCAAGAGGCG ACAACTGTGT TAAATGCTGC CAATGAGATT
GCCGTTGAAG CATTTTTACA GGGGCAAATT GGCTTTACGC AAATTGCAAA AGTGAACGAA
GCTTGTTTAG TGACTGTGCC TAAGCGCCCT ATGGGCAGCA TAGAAGATAT TTTAGCCTTA
GATGCGCAAA CCCGCGTCTA TGCGCGTGAG ACCTTAGCAA GCATCGCTTA G
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| Protein sequence | MQNMVILGAT GSIGASTLSV ISANPFAYSV YGLVANASVD KMLALCVAHK PKVAHMVDEA
AAKQLRAVLP ATLNIQVTTG MNDLLGLVTA AEVDTVMAAI VGAAGLVPTL EAVKAGKRVL
LANKEALVMS GELFIEATKR SGAVLLPVDS EHNAIFQCLP QEVQANLGRC DLAASGISHI
LLTGSGGPFL RSDLATLAAM TPAQACKHPN WSMGPKISVD SATMMNKGLE FIEARWLFNT
QAEQLKVVIH PQSVIHSMVQ YRDGSVIAQM GNPDMRTPIA HCMAYPQRIH SGVEPLDFFK
VGQLSFYEPD FERFPCLALA MEACAQGQEA TTVLNAANEI AVEAFLQGQI GFTQIAKVNE
ACLVTVPKRP MGSIEDILAL DAQTRVYARE TLASIA
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