Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1443 |
Symbol | |
ID | 5753172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1732204 |
End bp | 1733574 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641287713 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001553877 |
Protein GI | 160874561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGAT TGACACTTTT TTATCACCTG CAGGATGTAA ACGCCGAACA AGCCATCTTA GAACTCGCCG GCGCTGCCGA CTTTAATAAG CTACGCAGTG TCGATGATTT ACCTTGGATA GAACAGCTTG AGGCGAATCA CGTCGATGTT GCCATCATTG AGCTGTCCAG CCTTAGCCGT GAGGATTATC TCGGGCTACT GGACAATGTA GCTCTGTCCA ATATCGAGTT TATTTTTCTC TCCGACGGCC AGCCGAACCC CAATCTTGAT CAGTTAATGT CGCATTTTGC CGGTTATCAT TTTCGCAAAC CCTACGACAT GACGTTAATC AGCGATATTT TCGCCGATTT TGCCCAGTAT CTAGTGTCAT CCCCAATTCG GCCTCGGCCT TTTTCCAGCG AGCTAGACCA ATATGGGTTA CTCGTCGGCT CCTCTGCTGC GATGCATAAG CTGTATCGCA CGATTCGCCG CGTCTCCGCG ACCGACAGTA ATGTGCTGAT CATTGGTGAG AGTGGGGCGG GGAAAGAGCT GGTCGCCAAT ACCATACATC TTGCCAGCCC TAGGCTAAAC GAGCCTTTTA TCGCGATTAA CTGCGGCGCC TTAAGCCCTG AATTGGTCGA TAGCGAGTTG TTTGGCCACG TAAAAGGCGC GTTCACTGGC GCTCATCGCG ATCACAAAGG CGTATTTGAG CAGGCAGAAG GCGGAACCTT ATTTCTCGAT GAAGTCACCG AAATGCCAAT TGAGCATCAA GTGAAGTTAC TCAGAGTGCT TGAAAATAGC GAATATCGCC CTGTTGGCGG TGCCAAAGTG CAACTCGCCA ATGTGCGGAT TGTGGCGGCC ACCAATCGTG ATCCCATAGC GGCAATCGAG GCTGGGCAAT TTCGCGAGGA TTTATATTTC CGTTTGGCCC AGTTCCCTAT CCGCGTTCCG CCATTAAGGG AACGTGGCGA TGATATTCTT GGGTTGGCGC AGCATTTTCT TGCCTATCGT AACGTGGCAG AAAAGCAGAA TAAAAGCCTC GCTGATGACA GTGCGCAGAT GATCGCTGCG TACCCTTGGT CGGGTAATGT GCGTGAATTA AAGCATGCCA TTGAGCGAGC CTATATTCTG GCAGACCAAG AGATTTTACC CAGCCATTTA CAGTTGCCAC AGGCGAGTGA AATGGGAACA TCTTGCGATG ACCAAGTCGT TATCCCGCAT GGCATGCGTT TAGATGACTT AGAAAAAATC GCCATTTATC AAGCATTAGA AACAACTCAA GGCAATAAAA CCGATACCGC CGAGCAGCTG GGGATCAGCG TGAAAACTCT CTACAACAAG CTCAGCAAGT ACGAGCAGCA AGTCGAAGCG GGTGAATCGA CGGTGGAATA G
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Protein sequence | MARLTLFYHL QDVNAEQAIL ELAGAADFNK LRSVDDLPWI EQLEANHVDV AIIELSSLSR EDYLGLLDNV ALSNIEFIFL SDGQPNPNLD QLMSHFAGYH FRKPYDMTLI SDIFADFAQY LVSSPIRPRP FSSELDQYGL LVGSSAAMHK LYRTIRRVSA TDSNVLIIGE SGAGKELVAN TIHLASPRLN EPFIAINCGA LSPELVDSEL FGHVKGAFTG AHRDHKGVFE QAEGGTLFLD EVTEMPIEHQ VKLLRVLENS EYRPVGGAKV QLANVRIVAA TNRDPIAAIE AGQFREDLYF RLAQFPIRVP PLRERGDDIL GLAQHFLAYR NVAEKQNKSL ADDSAQMIAA YPWSGNVREL KHAIERAYIL ADQEILPSHL QLPQASEMGT SCDDQVVIPH GMRLDDLEKI AIYQALETTQ GNKTDTAEQL GISVKTLYNK LSKYEQQVEA GESTVE
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