Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1433 |
Symbol | |
ID | 5753162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1719332 |
End bp | 1720174 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287703 |
Product | ROK family protein |
Protein accession | YP_001553867 |
Protein GI | 160874551 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCC TATGTTTAGA TCTTGGGGGA ACTAAACTGA TGTTGGCACA GGTGGAAGGT AAAACCTTAC TCGACACTTG GCGGTATCCC GTTCCCGCCG ATGGCAATTT CGAACAGTTA TTCGATTTCC TCGTGACCTG TATCCACAGC CATCTCACGC CTGAAACCTA TGGTATTTCC ATCGGGATAC CCGGCATGGT GGATATGCAA AGCGGCACTT TACTCGAAGT GCTCAACATC CCTGCGTTGA CGGCAACGCA GTTAGCCCAG CAACTTAAAA ATACCTTTGA AATGGATGTG GTTGTGAATA ACGACGCTAA CCTCTTTGCC CTTGGCGAAG CTGTGCTCAA TCGCAATCAA GACATGCTCG GGATTACCTT AGGCACAGGC GTGGGCGCTG GGGTGATTTT TAATGGTCAG TTGTATTCGG GTAAACATTG CGCCGCAGGT GAAATCGGCA GTTTGAGTTA TCGCGATGGC ATAATTGAGC ACTATTGCTC GGGGCAATAC TTCACCACTC ATCACCACAT GAGTGGCGAG CATTTGTACC AAAAAGCCTG TGAAGGAGAC AGCCAAGCGC TACAAGCCTT CGCCCATTTT GGTGAACACT TGGCGCACAT GATCGCCCAA ACCTTACTGG TATACGATCC CAAAGATATC ATCCTTGGCG GCTCAGTCAG CCAAAGCTTT CCCTTCTTTA TTGAAGCGCT TAATCAGAAA TTGCAAAGCT TAGTCTATGG CCCCCAACTG GCGGACTTGA CGATTTCAGC CAGCCAACAT CACAATGCGG CACTCATTGG CGCGGCACAA TGGTTTTTAC AACAAAAGGA CTCAGTTAAG TGA
|
Protein sequence | MSVLCLDLGG TKLMLAQVEG KTLLDTWRYP VPADGNFEQL FDFLVTCIHS HLTPETYGIS IGIPGMVDMQ SGTLLEVLNI PALTATQLAQ QLKNTFEMDV VVNNDANLFA LGEAVLNRNQ DMLGITLGTG VGAGVIFNGQ LYSGKHCAAG EIGSLSYRDG IIEHYCSGQY FTTHHHMSGE HLYQKACEGD SQALQAFAHF GEHLAHMIAQ TLLVYDPKDI ILGGSVSQSF PFFIEALNQK LQSLVYGPQL ADLTISASQH HNAALIGAAQ WFLQQKDSVK
|
| |