| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1407 |
|---|
| Symbol | |
|---|
| ID | 5753136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1688453 |
|---|
| End bp | 1688950 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641287677 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_001553841 |
|---|
| Protein GI | 160874525 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0308338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.103968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTGA ACATGACTAC GAATATATAC AGCCAATCAG CGACAGACAT TCAAGGCAAC
ACAGTAAGTT TAGAGCAGTA TCGAGGCAAA GTACTCTTGA TCGTCAACAC CGCCAGTGAA
TGTGGATTTA CACCGCAATA CAAGGGATTA GAAGCGTTAT ATCAAGAATA TAAAGATCAA
GGATTAGTGA TTTTAGGCTT TCCTTGCAAT CAATTTGGCG CCCAAGAAAA AGCCGATGAG
CAAGGTATTC AAGCCTTTTG TGAATTGAAT TTTGGCGTGA CGTTTCCGCT ATTTTCTAAA
ATAGAAGTGA ATGGCGAACA TACCCATCCA CTTTATCAAT ACCTTAAGAA AGCCGCTCCC
GGTGTATTAG GTACTCAAGG TATCAAATGG AATTTCACCA AATTTTTAGT TAATCGCCGA
GGCGAAGCTA TTGAACGATT TGCATCGACC ACGAAACCCG AAGCATTAGA AAGTAAAATT
GCCGCTTTGC TAAAATAA
|
|---|
| Protein sequence | MEVNMTTNIY SQSATDIQGN TVSLEQYRGK VLLIVNTASE CGFTPQYKGL EALYQEYKDQ
GLVILGFPCN QFGAQEKADE QGIQAFCELN FGVTFPLFSK IEVNGEHTHP LYQYLKKAAP
GVLGTQGIKW NFTKFLVNRR GEAIERFAST TKPEALESKI AALLK
|
|---|
| |