| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1398 |
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| Symbol | |
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| ID | 5753127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1673216 |
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| End bp | 1674772 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641287668 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001553832 |
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| Protein GI | 160874516 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0531857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00306238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGGATT CGAGCGCTAC AGTTTCACAA CTTGCCTTGC TGCAACAGAA ACTTCATTCG
GCCAAACTTG CCCTCGATGA AGTCAATGAA GATAGAAATG CAAAGTTACA GACATTACTG
CAATTTATTG GTCACTTAAG CCTCGCCTGC AAAGGGCAAA ATCTTGAGCT GGATAATAAA
CTCGCCAAAC TTCGCCATAA CTTAAATACG TTTGAGCGAG TCGATGAGGC GTTGCCAGAA
TTAGTCGATG TCGAGCGCCT GTTAAAAGGC CAATATCACC ACGTGATGGT ACAACTCGAA
GAGAGTCGTA CGGGTTTGTC ACAGGTGATC CGTCAAATCC AACGCGTTAA CTCTGCACCT
GAAAAACTCA AAAAAGAAGT CAATTACTTC AAACAAGATC TGGCTAAACC TTTCCACACG
GTTTGGGAAT ATATTCCTAA AGTTAAGCAA ATCATCGGCT TCTACGAAAC CATATTACAG
CTACAATTTA ACGAATCAGA AAAACTCGAT GTCTTGCCTA AGCACAGGCA GCTAGCCCAC
GAACTGGCGC AGATGATTTC AGAAATCGAG TTCCGTAAAG ATCAGCGTGA CCAAGTCCTA
GTGATCAAAG AAGTGCTCTC TTATGAGATT GAAGTTGATA GCTTGCTCGA AGCCTACCAA
ACCATTTTAG CCTTATTGCT TGATAACATC GCCCGCGAGA AATCGGCATC GCAAGAGTTT
TTGTTTGCCC TCAACGATGC CTTAGCCGCA GTGCGCGAAG TAGTCAGTGA GTCTTACAAC
CACAATCAAC GCAGCTTCCA ACTCAAGACC CAGTTAAATC GTGAGATTAA TACCCGCGTC
GATAACGCCG GTGAAATCAT TATCGATGTC GAAGATGTCG TCGATCTTAA AGCCCAATTA
ACTGAGCAAC TTAACTCCAT TCGTTCGGCA TTGGCCCGTA AAGAAGCCTT AGAGCAAAGA
GAACAGGCCT TACTGCGTAA ATCAATGGAA ACAATGCGCA AAGAGCTTAA TGAATTAAGT
AATGAGGCCA ATACCTACAA AGAGCGATTG TTTGAACAAC AAAAACTCAA CTTGCTCGAT
AGCTTAACTC AATTGCCTAA CCGTGCCGCG TTAGAAGAGC GCATGGATTT GGAATACCGC
AACTATCAAC GGCATAAATC TCCACTTTGG GTGGCGGTTG CCGATATTGA CCACTTCAAA
ACCATCAACG ACAGCTTTGG CCATAGCACG GGTGATAAAA CCTTGCAGGT GATTGCAATG
GCATTGAAAA ACTCACTACG AGATACCGAA TTTGTGGCCC GTTATGGCGG CGAAGAATTT
GTCCTGTTAT TACCTGATGT CGCACCTGCT GATATCGCTC AACTTTTAAA CAGAGTGCGC
GAGAAAGTAA AAAATATTCC ATTTAAATTT AAAAATCAGA GAATTACAGT TACAGTATCT
ATAGGGGCTG CGCAAGTTAT GGGAAGTGAG CTCATACATG AGACCTTCGA ACGCGCCGAT
GCAGCACTCT ATAAAGCAAA ACACGAAAGC AGAGACAGGG TTGTGATTGA CGTATAA
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| Protein sequence | MKDSSATVSQ LALLQQKLHS AKLALDEVNE DRNAKLQTLL QFIGHLSLAC KGQNLELDNK
LAKLRHNLNT FERVDEALPE LVDVERLLKG QYHHVMVQLE ESRTGLSQVI RQIQRVNSAP
EKLKKEVNYF KQDLAKPFHT VWEYIPKVKQ IIGFYETILQ LQFNESEKLD VLPKHRQLAH
ELAQMISEIE FRKDQRDQVL VIKEVLSYEI EVDSLLEAYQ TILALLLDNI AREKSASQEF
LFALNDALAA VREVVSESYN HNQRSFQLKT QLNREINTRV DNAGEIIIDV EDVVDLKAQL
TEQLNSIRSA LARKEALEQR EQALLRKSME TMRKELNELS NEANTYKERL FEQQKLNLLD
SLTQLPNRAA LEERMDLEYR NYQRHKSPLW VAVADIDHFK TINDSFGHST GDKTLQVIAM
ALKNSLRDTE FVARYGGEEF VLLLPDVAPA DIAQLLNRVR EKVKNIPFKF KNQRITVTVS
IGAAQVMGSE LIHETFERAD AALYKAKHES RDRVVIDV
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