| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1389 |
|---|
| Symbol | |
|---|
| ID | 5753118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1662693 |
|---|
| End bp | 1663604 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641287659 |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_001553823 |
|---|
| Protein GI | 160874507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.13608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAC GATTACCACC GCTTAATGCG GTTAAAGCAT TTGAGGCAGC TGCGCGGCAT
TTGAGCTTTA CGCGCGCAGC AGAAGAATTG TTTGTTACGC AAGCTGCGGT GAGCCATCAA
ATAAAGGCAT TAGAAGATTT CCTCGGATTA AAATTATTTC GCCGAAAGAA CCGTTCTTTG
CTTTTAACTG AAGAAGGGCA GAGCTACTTC CTCGACATCA AAGACATCTT TATTCAACTC
GCCGATGCTA CCGACCGATT ACTCGCCCGC AGTGCGATTG GTTCTCTGAC GGTCAGTATG
TCGCCCAGTT TTGCAATTCA ATGGTTAGTG CCGCGTTTGG CAAAGTTCAG TGAGAAAAAT
CCCGATATCG ACGTGCGTAT TAAAGCCGTC GATACCGAAG CGAGCTCATT AACCGATGAT
GTGGATGTCG CCATTTATTA TGGTCTAGGC AATTGGCCTG GTCTGCGCGC CGATAAGCTC
AGAAACGAAG TGCTCATTCC TGTGTGTTCG CCCATGTTAC TCAATGGCCC TAAGCCGCTG
TCAAAACCGA GCGATTTAAA ATATCACACG CTATTACATG ATATGAATCG TCACGATTGG
CAGGCGTGGT TTAGACAATG TGGGATTAAC GATATTAATG TGAACCAAGG CCCCATCTTC
AGTCATTCGT CCTTGGTATT GCAGGCGGCG GCCCATGGTC AAGGCGTGGC TTTAGGTTAC
AGCGTACTGG CGCGTCCCGA TATAAAAGCG GGGCGTCTTG TGTGCCCATT TCAAGAAGTC
TTGGTCAGTA AAGATGCTTA CTACTTGGTT TGCCAGCAGA ATCACGCAGA ACTGGGTAAG
GTCGTCGCGT TTCGCGAATG GATGTTAGAC ATGTTTGCTG AGGAGTCGCG CAGTGAGTTG
TTGCCCGGAT AA
|
|---|
| Protein sequence | MSRRLPPLNA VKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEDFLGL KLFRRKNRSL
LLTEEGQSYF LDIKDIFIQL ADATDRLLAR SAIGSLTVSM SPSFAIQWLV PRLAKFSEKN
PDIDVRIKAV DTEASSLTDD VDVAIYYGLG NWPGLRADKL RNEVLIPVCS PMLLNGPKPL
SKPSDLKYHT LLHDMNRHDW QAWFRQCGIN DINVNQGPIF SHSSLVLQAA AHGQGVALGY
SVLARPDIKA GRLVCPFQEV LVSKDAYYLV CQQNHAELGK VVAFREWMLD MFAEESRSEL
LPG
|
|---|
| |