Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1380 |
Symbol | |
ID | 5753109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1653730 |
End bp | 1654497 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641287650 |
Product | integrase catalytic region |
Protein accession | YP_001553814 |
Protein GI | 160874498 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00404649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.253608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCC GAAGCACTGA GCTATCGGTC ATCAAAGACT GGGTCCAATA TTGGCGTAAC TATATGCCAC GATTGGGGAC GCGTAAGCTC TATACTTTGA TACAGCCTAA GCTGGTTGAA CATGATATCA AACTCGGGCG AGACGGGTTC TTTACCTACT TGAGAAGTGA AGGCTTGCTA GTTAAGCCCA AGAGAAGCTT CACAAAAACG ACATTCAGCA AGCATTGGAT GAAGAAGCAT CCCAACCTGC TGAAGGAAGA GGGACTACAC GATGCCGAGC ATGTACTGGT CAGCGATATC ACTTATCTCG AATCAGACCA AGGCGTGCAC TATTTGTCAC TAGTGACCGA TGCCGCGACA CGTAAGATAG TCGGTCATCA CTTGAGTTCG GACATGAAAG CAGAAAGCGT AGTGAAAGCA CTAAAAATGG CGGTCAAAGA TAAGCGCTAT AGCGCTAATG CGATCCATCA CTCAGACCGA GGTTCGCAAT ACTGCTCAGC TGTTTATCAA GATGAACTGC AGGCCAACCA TATTCAGCCG TCGATGACAG ACGGTTATGA TTGCTATCAA AATGCGTTAG CAGAACGAGT AAACGGGATC CTGAAGCAGG AGTTTTTACT CTACCGATGT AAAACGCTGG AAGAGCTGAA GAGACTTGTT AGAGAATCGA TAGCGATATA CAACGAAATG AGACCGCACC TGAGTTTGGA TATGGAAACA CCCAATCAGG TGCATAATAG AAAAGGCCAG CTACTGGAGC TGGCCTAG
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Protein sequence | MASRSTELSV IKDWVQYWRN YMPRLGTRKL YTLIQPKLVE HDIKLGRDGF FTYLRSEGLL VKPKRSFTKT TFSKHWMKKH PNLLKEEGLH DAEHVLVSDI TYLESDQGVH YLSLVTDAAT RKIVGHHLSS DMKAESVVKA LKMAVKDKRY SANAIHHSDR GSQYCSAVYQ DELQANHIQP SMTDGYDCYQ NALAERVNGI LKQEFLLYRC KTLEELKRLV RESIAIYNEM RPHLSLDMET PNQVHNRKGQ LLELA
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