Gene Sbal195_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1380 
Symbol 
ID5753109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1653730 
End bp1654497 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID641287650 
Productintegrase catalytic region 
Protein accessionYP_001553814 
Protein GI160874498 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00404649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.253608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCC GAAGCACTGA GCTATCGGTC ATCAAAGACT GGGTCCAATA TTGGCGTAAC 
TATATGCCAC GATTGGGGAC GCGTAAGCTC TATACTTTGA TACAGCCTAA GCTGGTTGAA
CATGATATCA AACTCGGGCG AGACGGGTTC TTTACCTACT TGAGAAGTGA AGGCTTGCTA
GTTAAGCCCA AGAGAAGCTT CACAAAAACG ACATTCAGCA AGCATTGGAT GAAGAAGCAT
CCCAACCTGC TGAAGGAAGA GGGACTACAC GATGCCGAGC ATGTACTGGT CAGCGATATC
ACTTATCTCG AATCAGACCA AGGCGTGCAC TATTTGTCAC TAGTGACCGA TGCCGCGACA
CGTAAGATAG TCGGTCATCA CTTGAGTTCG GACATGAAAG CAGAAAGCGT AGTGAAAGCA
CTAAAAATGG CGGTCAAAGA TAAGCGCTAT AGCGCTAATG CGATCCATCA CTCAGACCGA
GGTTCGCAAT ACTGCTCAGC TGTTTATCAA GATGAACTGC AGGCCAACCA TATTCAGCCG
TCGATGACAG ACGGTTATGA TTGCTATCAA AATGCGTTAG CAGAACGAGT AAACGGGATC
CTGAAGCAGG AGTTTTTACT CTACCGATGT AAAACGCTGG AAGAGCTGAA GAGACTTGTT
AGAGAATCGA TAGCGATATA CAACGAAATG AGACCGCACC TGAGTTTGGA TATGGAAACA
CCCAATCAGG TGCATAATAG AAAAGGCCAG CTACTGGAGC TGGCCTAG
 
Protein sequence
MASRSTELSV IKDWVQYWRN YMPRLGTRKL YTLIQPKLVE HDIKLGRDGF FTYLRSEGLL 
VKPKRSFTKT TFSKHWMKKH PNLLKEEGLH DAEHVLVSDI TYLESDQGVH YLSLVTDAAT
RKIVGHHLSS DMKAESVVKA LKMAVKDKRY SANAIHHSDR GSQYCSAVYQ DELQANHIQP
SMTDGYDCYQ NALAERVNGI LKQEFLLYRC KTLEELKRLV RESIAIYNEM RPHLSLDMET
PNQVHNRKGQ LLELA