| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1351 |
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| Symbol | |
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| ID | 5753080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1608250 |
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| End bp | 1609935 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641287622 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001553786 |
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| Protein GI | 160874470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.875987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTCATT CACTCCAGCA AAAATATTAT AACTACATCA TAGTCGGCGC CGGTTCTGCA
GGGTGTGTGC TCGCTAATCG TCTGTCTAAG GATCCTAAAA ACGAAGTACT GTTATTAGAA
ACCGGTGGCA GCGATAAGAG CATCTTTATT CAGATGCCGA CGGCGTTATC GATTCCGATG
AACAGCCCTA AATATGCTTG GCAGTTTGAG ACGCAGCCTG AGCCGCATTT AGATAATCGC
AAGATGCATT GTCCTCGGGG CAAAGTGCTT GGCGGTTCAT CGTCGATCAA CGGCATGGTG
TATGTCCGTG GTCATGCCAG AGACTTTGAT GAGTGGCAGG CACAAGGGGC GACCAATTGG
GATTACAGCC ATTGCTTGCC GTACTTTAAA AAGGCAGAAA CCTGGGCCTT TGGTGGTGAT
GAGTATCGCG GCGAGTCTGG ACCGTTAGGC GTGAATAACG GCAACCAGAT GCAAAATCCA
TTATACCAAG CCTTTGTAGA TGCGGGCATT GCGGCGGGGT ATTTATCGAC CGCCGATTAT
AATGCGGCGC AGCAAGAAGG TTTTGGTCCT ATGCATATGA CGGTCAAAAA AGGCGTGCGT
TGGTCTACCG CTAATGCTTA TCTACGCCCG GCGATGGCCA GACGTAACCT CACTGTGTTG
ACCCATACCT TAGTGCATAA AGTGTTATTG GAAGGGCAAG CTGCCGTTGG CGTTCGCATT
GAGCACAAAG GCAAAGTTGA AGATATTCGT TGTAATAAAG AAGTGATTTT AGCTGCTGGC
TCAATAGGTT CGCCGCATTT GTTGCAATTA TCAGGCATTG GCGATCCCCA AGTATTGGCC
GATGCAGGGG TCGAGTTACA ACATGAGTTG CCCGGTGTCG GTCAGAATTT ACAGGATCAT
TTAGAGTTTT ATTTCCAATT CAAATGCCTT AAACCGATTT CACTCAATGG CAAGTTAGAT
CCTTTCAGCA AGTTCTTAAT CGGTGCACGG TGGATCTTAG ATAAATCTGG CCTAGGGGCC
ACGAATCACT TTGAATCCTG TGGTTTTATT CGCTCAAAAG CGGGCCTCGA GTGGCCAGAT
TTACAGTACC ACTTTTTACC TGCGGCTATG CGTTACGATG GTAAAGAAGC CTTTGCGGGG
CATGGTTTTC AGGTACATGT AGGCCATAAC AAGCCTAAAA GCCGTGGTGC CGTGACCTTA
GTGTCGGCAG ATCCTAAAGC GCCGCCTAAG ATCCAGTTCA ATTATTTACA GCATCCTGAT
GATATTGAAG GCTTTAGAGC CTGTGTGCGT TTGACCCGTG AGATCATCAA TCAAGCGCCA
TTCGATGAGT ATCGCGGCGA GGAAATTCAA CCCGGCACAC AAGTGCAAAC CGATGAGCAA
ATCGATGCCT TTGTGCGTCA ATCGGTTGAG AGTGCTTATC ATCCTTCTTG TTCATGCAAG
ATGGGCACAG ATGCGATGGC GGTAGTGGAT CCTGAAACCC GCGTGCACGG CTTGCAGAAT
TTACGGGTAG TGGATTCTTC TATTTTCCCG ACTATCCCAA ACGGCAATTT GAATGCGCCG
ACCATCATGT TGGCTGAGCG CGCCGCGGAT ATGATCTTAG AGGCTGAGAT GTTAGCGCCA
GCAGATTCCG CCGTTGTGGT TGCCGACGCT TGGCAAACCA CACAAAGAAG CACTGCGACA
AGTTAA
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| Protein sequence | MTHSLQQKYY NYIIVGAGSA GCVLANRLSK DPKNEVLLLE TGGSDKSIFI QMPTALSIPM
NSPKYAWQFE TQPEPHLDNR KMHCPRGKVL GGSSSINGMV YVRGHARDFD EWQAQGATNW
DYSHCLPYFK KAETWAFGGD EYRGESGPLG VNNGNQMQNP LYQAFVDAGI AAGYLSTADY
NAAQQEGFGP MHMTVKKGVR WSTANAYLRP AMARRNLTVL THTLVHKVLL EGQAAVGVRI
EHKGKVEDIR CNKEVILAAG SIGSPHLLQL SGIGDPQVLA DAGVELQHEL PGVGQNLQDH
LEFYFQFKCL KPISLNGKLD PFSKFLIGAR WILDKSGLGA TNHFESCGFI RSKAGLEWPD
LQYHFLPAAM RYDGKEAFAG HGFQVHVGHN KPKSRGAVTL VSADPKAPPK IQFNYLQHPD
DIEGFRACVR LTREIINQAP FDEYRGEEIQ PGTQVQTDEQ IDAFVRQSVE SAYHPSCSCK
MGTDAMAVVD PETRVHGLQN LRVVDSSIFP TIPNGNLNAP TIMLAERAAD MILEAEMLAP
ADSAVVVADA WQTTQRSTAT S
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