| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1343 |
|---|
| Symbol | |
|---|
| ID | 5753072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1598595 |
|---|
| End bp | 1600244 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641287614 |
|---|
| Product | malate synthase |
|---|
| Protein accession | YP_001553778 |
|---|
| Protein GI | 160874462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01344] malate synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0400392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC ACACTTTGAG TGAACAGCAA TTGAATTCGA CACTGGGTAA AGCTACAGCA
AACGCCACGC TTAATATTGT GGGTCGTGAC ATTCCAGGCC AAGAAGTCAT CTTTACCGAA
GGGGCTGTCG CCTTACTCGA ATCCCTTTGT CGTGAGTTTG CCGACGAAGT ACCAGCCTTA
CTCGCTAAAC GTAAAGATAA GCAAGCGCGT ATCGATAAAG GATCATTACC CGACTTTCTG
CCTGAAACCC GCGCTATTCG TGATGGTGCA TGGCAAATTC GCGGTATTCC CGATGACTTG
CTTGACCGCC GTGTAGAAAT CACAGGTCCC GTTGAACGTA AGATGGTGAT TAACGCACTC
AACGCCAATG CCAAAGTGTT TATGGCCGAT TTCGAAGATT CCTTAGCACC AAGCTGGGAA
AAAGTCGTCG AAGGTCAAAT CAATCTACGT GATGCCGTGC GTGGTGATAT TGAGTACACA
GCACCGGATA CAGGTAAGCA CTACAAATTA GGACCAAATC CGGCAGTGCT TATTTGCCGC
GTTCGTGGTC TGCACCTTAA AGAAAAACAC GTGCAGTTTA ATGGCAAAGC GATTCCTGGC
TCACTGTTTG ATTTCGCACT GTATTTCTAC CACAACTATC GCCAACTTTT GGCCAAGGGT
AGCGGTCCAT ACTTTTATAT CCCTAAGTTA GAAAGTCATG TTGAAGCGCG CTGGTGGGCA
AAAGTATTTG CTTTTGTTGA GGAAAGGTTT TGTCTGCAAG CGGGCACGAT TAAATGTACT
TGCCTGATCG AGACGTTACC GGCCGTGTTC GAAATGGACG AAATCCTCTA CGAGCTGCGT
TCCAATATCG TCGCGCTGAA CTGTGGTCGC TGGGATTACA TCTTCAGCTA TATCAAAACA
TTAAAGCGTC ATAGCGACCG TGTTTTACCG GATCGCCAAG CCGTCACTAT GGATACGCCT
TTCTTAAGCG CTTATTCAAG ACTCTTGATT AAGACCTGCC ACAAACGCGG TGCGTTAGCT
ATGGGCGGTA TGGCGGCCTT TATTCCAGCC AAAGATCCGG TTCAGAACGA AGCGGTATTG
CAGCGAGTTC GTCGAGATAA AGAACTAGAG GCGCGTAACG GCCACGATGG CACTTGGGTG
GCGCACCCAG GTCTTGCCGA TACCGCTATG GGGATTTTCA ACGAATACAT AGGCCAAGAT
CACTGTAATC AATTACATAT TACCCGTGAT GTAGACGCGC CAATTCTGGC TAGCGAACTG
CTTAAAACCT GCGACGGTGA GCGCACTGAA CAGGGGATGC GCCTGAACAT TCGTATCGCA
CTGCAGTATT TAGAGGCGTG GATCAGCGGC AACGGTTGCG TACCTATTTA CGGCTTAATG
GAAGATGCGG CGACGGCTGA GATTTCTAGA GCCTCAATTT GGCAATGGAT CCAACACGGT
AAGTCGTTAT CAAACGGCAA ACTCGTGACC AAGCAACTCT TTAAAGACAT GTTGGTTGAA
GAGCTGTCGA ACGTGAAAAA AGAAGTGGGT AGCGACAGAT TCACCCATGG CAAATTCACC
CAAGCGGTGG TATTGCTCGA AGACATTACC ACCTCCGACG AGCTGGTCGA TTTCTTAACC
TTACCCGGTT ACGAAATGCT GACTGCCTAG
|
|---|
| Protein sequence | MTEHTLSEQQ LNSTLGKATA NATLNIVGRD IPGQEVIFTE GAVALLESLC REFADEVPAL
LAKRKDKQAR IDKGSLPDFL PETRAIRDGA WQIRGIPDDL LDRRVEITGP VERKMVINAL
NANAKVFMAD FEDSLAPSWE KVVEGQINLR DAVRGDIEYT APDTGKHYKL GPNPAVLICR
VRGLHLKEKH VQFNGKAIPG SLFDFALYFY HNYRQLLAKG SGPYFYIPKL ESHVEARWWA
KVFAFVEERF CLQAGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT
LKRHSDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPVQNEAVL
QRVRRDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HCNQLHITRD VDAPILASEL
LKTCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG
KSLSNGKLVT KQLFKDMLVE ELSNVKKEVG SDRFTHGKFT QAVVLLEDIT TSDELVDFLT
LPGYEMLTA
|
|---|
| |