Gene Sbal195_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1342 
Symbol 
ID5753071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1595273 
End bp1597735 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content45% 
IMG OID641287613 
ProductTonB-dependent receptor plug 
Protein accessionYP_001553777 
Protein GI160874461 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00424571 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAT TTCGTTTGTC GCTAACCGCA CTCGCCTGCC TTTCTGTTTT ATCGCAAACC 
GCACACGCCG AAGCCAACTC GATATCAGCA AATGCTGAAG CCAACGTTGA GCGCATCACG
GTTTATGGCA GACAGAACTC AGTAGTGAAG AATTCAGGGC TGGCGACTAA ATCCGACATG
TCTCTTATGG AAACCCCAGC AGCTGTAGTG ATTGTTGACC AAGAGCTGAT CGAAACCCAA
GGTACAGATA ATCTGCAGGA CTTGATCCGT AACATCAGTG GCGTAACTCA AGCGGGAAAT
AACTATGGCA TTGGTGACAA CATAGTCATC CGTGGTTTAG GCGCAAATTA CACCTATGAC
GGTATGTATG GCGGTGCAGG CCTAGGAAAT ACCTTCAACC CTACGCGCTC TTTAACCAAC
GTTGAATCCG TTGAAGTATT AAAAGGCCCA GCGACTGGAC TCTATGGCAT GGGAAGTGCT
GGCGGCGTGA TCAATCTGAT TGAAAAGAAA CCACAGTTTG AGTCAAAGCA TAAGTTCAGC
GCCGAAATGG GCCAATGGGA CACCTACTCC CTTGCTCTGG ATAGCACGGG CGGCCTGAGT
GATGATGTCG CCTACCGTTT AGTGGCTAAA TCTGGCCGCA GTGATGGATA TCGCGATATA
GGTACAGACA GAGACGAAAT CTATGGCGCC TTAAAATGGG TATTAAGTGA TAGCCAAGAT
TTAATGCTTT CAGGTGCTTA TATAAAAGAT GCTATTGCCG TTGATTCAAT TGGTCACCCG
ATTCGGATTT ACAATGCAGA ATCTGTCGGC GGTAAGAGCG CGGGCGAGGT CACGTGGCAA
GATCTGGTTA ATGATCCCAA CGGTAATGGT CTACAACTCA CCGATGCACA GCGTCAGCAG
TTAGCGGCCT CGTTGTCGGG CGCTGACGGC TTAACCCCCT ATTCGTTTGG TGATGCAGGG
CTGATTTCAC CCATGGCGAA GGACAATGAG GGTGAAGAGT TAAGATTTAA ACTGACCCAT
AATATCTATT TCACTGACAA TTTGTTCCTC AATCAACAAT TGCAGTATCG CGACTACACA
TCAGGTTTCG CCCGCCAAAC TGGCGCCTAT AACTACGTCT ATTGGAAGCG TAACATCAAG
ATTAAAAACG TTCTTACCGA CGTGATTAAC GAAGAGCCTA GATCACCATT AGTTGAAAAT
GGCGTACTTT ATCCTTTTGC TGCAAGACGT CAGGAATACC GTAAAGTCGA TGCCGACGAA
ACGTCTTGGC AGTACTTTGC CGATCTACGT TATGACTTCC AAATTGGCAA TATAGACAAT
GAATTATTGG TCAATGCCAA CTATGAAGAC CGTAATATTC GCTTCCAGCA ATATTCTATC
TTCGATGCCG ATCAAATCTA TAAAAATAAG GATGGAGAAA TTACTTATCA AGGTTCCTTG
CCTTATATTT ACGACATCCG TAATCCTAAT TGGGGCACAG GTAAGTTTGA AGACTATGAC
CCACTCAAGA CCGCGAACTA TGACAAAAAG GTCAGTGCTT GGGGTCTAGG AGTACAACAC
GTGGGATATT TAGGACATGG CTTCACCACA CGTGTAGGTG TCGCATTTAA CGAGATAAAA
CAAAGTTATG AACACTTAGG TGTCGATGAA CGCTATAGTG CAAGTCAAGC TGCTGCGACG
CAGGAAGAGG ACACTACGGA TAACGGCATC ACCTATAATC TAGGTTTAAC TTATATGCCA
ACGGACGATT TATCTTTCTT TGTGAACCAC TCTAAGGGGC GGACTGCTTA CAGTATATTA
GGCACTGTGA CCGGCAAAAA TACTGACCGT GAAGATTCAG AATCGGTAAG CAATGATCTG
GGTATGCGCT TTAAAGCCTT TGATGATCAA ATGCTCGCAT CACTGGTGCT CTTTAAGAGC
TCGCGCACCA ATGTGCCCTA TACGAATGAA GAATATAAAA TAGGCGTATC AGGACCAGAA
GTACCCGTGT ATTTTTACGA TGGCAGCGAA GATACTCAGG GTGTCGAACT CGATCTCAAT
GCCCACCTGA ATGATCAATG GCGCGTTAAC CTCAACGGCA TGTATCAAGA TGCAAGGGAT
AAACAAAATC CAAATAGTTT AACCTACAAT AGCCGACAAA AAGGCGTACC TTATGTCACA
GCCAGTGCTT GGGTGACCTA TGGCGCCGAT TGGTTTAGCT TATCAAGCCC AATCGAATTA
AGCCTAGGAG CAAAATACGT TGGCGATCGT AGTACACACT CTAGCTCATT TGGTATTCCA
GACGGTTACG TGCCTAGCTA TACCGTCGTT GACTCGGCGG TGAGTTACAG CACTGATTCT
TGGAAAATCC AGCTTAATAT CAATAATCTA TTCAATAAAG ACTATTACAG TAAAGCGATG
TTCTTAGGCG GTATGCCGGG TGAAGAACGC AACGTCAAAC TGCAATACAG CTATAGTTTT
TGA
 
Protein sequence
MKPFRLSLTA LACLSVLSQT AHAEANSISA NAEANVERIT VYGRQNSVVK NSGLATKSDM 
SLMETPAAVV IVDQELIETQ GTDNLQDLIR NISGVTQAGN NYGIGDNIVI RGLGANYTYD
GMYGGAGLGN TFNPTRSLTN VESVEVLKGP ATGLYGMGSA GGVINLIEKK PQFESKHKFS
AEMGQWDTYS LALDSTGGLS DDVAYRLVAK SGRSDGYRDI GTDRDEIYGA LKWVLSDSQD
LMLSGAYIKD AIAVDSIGHP IRIYNAESVG GKSAGEVTWQ DLVNDPNGNG LQLTDAQRQQ
LAASLSGADG LTPYSFGDAG LISPMAKDNE GEELRFKLTH NIYFTDNLFL NQQLQYRDYT
SGFARQTGAY NYVYWKRNIK IKNVLTDVIN EEPRSPLVEN GVLYPFAARR QEYRKVDADE
TSWQYFADLR YDFQIGNIDN ELLVNANYED RNIRFQQYSI FDADQIYKNK DGEITYQGSL
PYIYDIRNPN WGTGKFEDYD PLKTANYDKK VSAWGLGVQH VGYLGHGFTT RVGVAFNEIK
QSYEHLGVDE RYSASQAAAT QEEDTTDNGI TYNLGLTYMP TDDLSFFVNH SKGRTAYSIL
GTVTGKNTDR EDSESVSNDL GMRFKAFDDQ MLASLVLFKS SRTNVPYTNE EYKIGVSGPE
VPVYFYDGSE DTQGVELDLN AHLNDQWRVN LNGMYQDARD KQNPNSLTYN SRQKGVPYVT
ASAWVTYGAD WFSLSSPIEL SLGAKYVGDR STHSSSFGIP DGYVPSYTVV DSAVSYSTDS
WKIQLNINNL FNKDYYSKAM FLGGMPGEER NVKLQYSYSF