Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1342 |
Symbol | |
ID | 5753071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1595273 |
End bp | 1597735 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287613 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001553777 |
Protein GI | 160874461 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00424571 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAT TTCGTTTGTC GCTAACCGCA CTCGCCTGCC TTTCTGTTTT ATCGCAAACC GCACACGCCG AAGCCAACTC GATATCAGCA AATGCTGAAG CCAACGTTGA GCGCATCACG GTTTATGGCA GACAGAACTC AGTAGTGAAG AATTCAGGGC TGGCGACTAA ATCCGACATG TCTCTTATGG AAACCCCAGC AGCTGTAGTG ATTGTTGACC AAGAGCTGAT CGAAACCCAA GGTACAGATA ATCTGCAGGA CTTGATCCGT AACATCAGTG GCGTAACTCA AGCGGGAAAT AACTATGGCA TTGGTGACAA CATAGTCATC CGTGGTTTAG GCGCAAATTA CACCTATGAC GGTATGTATG GCGGTGCAGG CCTAGGAAAT ACCTTCAACC CTACGCGCTC TTTAACCAAC GTTGAATCCG TTGAAGTATT AAAAGGCCCA GCGACTGGAC TCTATGGCAT GGGAAGTGCT GGCGGCGTGA TCAATCTGAT TGAAAAGAAA CCACAGTTTG AGTCAAAGCA TAAGTTCAGC GCCGAAATGG GCCAATGGGA CACCTACTCC CTTGCTCTGG ATAGCACGGG CGGCCTGAGT GATGATGTCG CCTACCGTTT AGTGGCTAAA TCTGGCCGCA GTGATGGATA TCGCGATATA GGTACAGACA GAGACGAAAT CTATGGCGCC TTAAAATGGG TATTAAGTGA TAGCCAAGAT TTAATGCTTT CAGGTGCTTA TATAAAAGAT GCTATTGCCG TTGATTCAAT TGGTCACCCG ATTCGGATTT ACAATGCAGA ATCTGTCGGC GGTAAGAGCG CGGGCGAGGT CACGTGGCAA GATCTGGTTA ATGATCCCAA CGGTAATGGT CTACAACTCA CCGATGCACA GCGTCAGCAG TTAGCGGCCT CGTTGTCGGG CGCTGACGGC TTAACCCCCT ATTCGTTTGG TGATGCAGGG CTGATTTCAC CCATGGCGAA GGACAATGAG GGTGAAGAGT TAAGATTTAA ACTGACCCAT AATATCTATT TCACTGACAA TTTGTTCCTC AATCAACAAT TGCAGTATCG CGACTACACA TCAGGTTTCG CCCGCCAAAC TGGCGCCTAT AACTACGTCT ATTGGAAGCG TAACATCAAG ATTAAAAACG TTCTTACCGA CGTGATTAAC GAAGAGCCTA GATCACCATT AGTTGAAAAT GGCGTACTTT ATCCTTTTGC TGCAAGACGT CAGGAATACC GTAAAGTCGA TGCCGACGAA ACGTCTTGGC AGTACTTTGC CGATCTACGT TATGACTTCC AAATTGGCAA TATAGACAAT GAATTATTGG TCAATGCCAA CTATGAAGAC CGTAATATTC GCTTCCAGCA ATATTCTATC TTCGATGCCG ATCAAATCTA TAAAAATAAG GATGGAGAAA TTACTTATCA AGGTTCCTTG CCTTATATTT ACGACATCCG TAATCCTAAT TGGGGCACAG GTAAGTTTGA AGACTATGAC CCACTCAAGA CCGCGAACTA TGACAAAAAG GTCAGTGCTT GGGGTCTAGG AGTACAACAC GTGGGATATT TAGGACATGG CTTCACCACA CGTGTAGGTG TCGCATTTAA CGAGATAAAA CAAAGTTATG AACACTTAGG TGTCGATGAA CGCTATAGTG CAAGTCAAGC TGCTGCGACG CAGGAAGAGG ACACTACGGA TAACGGCATC ACCTATAATC TAGGTTTAAC TTATATGCCA ACGGACGATT TATCTTTCTT TGTGAACCAC TCTAAGGGGC GGACTGCTTA CAGTATATTA GGCACTGTGA CCGGCAAAAA TACTGACCGT GAAGATTCAG AATCGGTAAG CAATGATCTG GGTATGCGCT TTAAAGCCTT TGATGATCAA ATGCTCGCAT CACTGGTGCT CTTTAAGAGC TCGCGCACCA ATGTGCCCTA TACGAATGAA GAATATAAAA TAGGCGTATC AGGACCAGAA GTACCCGTGT ATTTTTACGA TGGCAGCGAA GATACTCAGG GTGTCGAACT CGATCTCAAT GCCCACCTGA ATGATCAATG GCGCGTTAAC CTCAACGGCA TGTATCAAGA TGCAAGGGAT AAACAAAATC CAAATAGTTT AACCTACAAT AGCCGACAAA AAGGCGTACC TTATGTCACA GCCAGTGCTT GGGTGACCTA TGGCGCCGAT TGGTTTAGCT TATCAAGCCC AATCGAATTA AGCCTAGGAG CAAAATACGT TGGCGATCGT AGTACACACT CTAGCTCATT TGGTATTCCA GACGGTTACG TGCCTAGCTA TACCGTCGTT GACTCGGCGG TGAGTTACAG CACTGATTCT TGGAAAATCC AGCTTAATAT CAATAATCTA TTCAATAAAG ACTATTACAG TAAAGCGATG TTCTTAGGCG GTATGCCGGG TGAAGAACGC AACGTCAAAC TGCAATACAG CTATAGTTTT TGA
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Protein sequence | MKPFRLSLTA LACLSVLSQT AHAEANSISA NAEANVERIT VYGRQNSVVK NSGLATKSDM SLMETPAAVV IVDQELIETQ GTDNLQDLIR NISGVTQAGN NYGIGDNIVI RGLGANYTYD GMYGGAGLGN TFNPTRSLTN VESVEVLKGP ATGLYGMGSA GGVINLIEKK PQFESKHKFS AEMGQWDTYS LALDSTGGLS DDVAYRLVAK SGRSDGYRDI GTDRDEIYGA LKWVLSDSQD LMLSGAYIKD AIAVDSIGHP IRIYNAESVG GKSAGEVTWQ DLVNDPNGNG LQLTDAQRQQ LAASLSGADG LTPYSFGDAG LISPMAKDNE GEELRFKLTH NIYFTDNLFL NQQLQYRDYT SGFARQTGAY NYVYWKRNIK IKNVLTDVIN EEPRSPLVEN GVLYPFAARR QEYRKVDADE TSWQYFADLR YDFQIGNIDN ELLVNANYED RNIRFQQYSI FDADQIYKNK DGEITYQGSL PYIYDIRNPN WGTGKFEDYD PLKTANYDKK VSAWGLGVQH VGYLGHGFTT RVGVAFNEIK QSYEHLGVDE RYSASQAAAT QEEDTTDNGI TYNLGLTYMP TDDLSFFVNH SKGRTAYSIL GTVTGKNTDR EDSESVSNDL GMRFKAFDDQ MLASLVLFKS SRTNVPYTNE EYKIGVSGPE VPVYFYDGSE DTQGVELDLN AHLNDQWRVN LNGMYQDARD KQNPNSLTYN SRQKGVPYVT ASAWVTYGAD WFSLSSPIEL SLGAKYVGDR STHSSSFGIP DGYVPSYTVV DSAVSYSTDS WKIQLNINNL FNKDYYSKAM FLGGMPGEER NVKLQYSYSF
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