| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1329 |
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| Symbol | |
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| ID | 5753057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1580799 |
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| End bp | 1583564 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641287599 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001553764 |
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| Protein GI | 160874448 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.600674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATAG ATGTACCTAT TTCGCAGCAA GAGCTGGATA ACTGGTTGAG GGACGTAAAC
TTAGTCGCCG AGATATCAAA CAGTAAAGCA ATATTAATAG CATGGAATGC TGCGGGTGAA
CTTAGCAGTA TGTTAAGTTC AGATTCTGCG GCTGAAAGCG AAATACAGGC AATACTCTGT
CAGTTAAGTG GCAATCATTC GGCGAAAACC CTGCCTATCG CAACATTATC AGCTAATACG
TCATCAACCG CTACACAGTC CAAAGCCACT CCATCAACAG CCACGCCATT AAAAACGACG
ACATCAGAAC TCACTTCCAA TCCGTCCGAT ACGTTTGAAA CTTCCGTTGA TGCCCAATTA
GCCCAAGAAC AGTTGGTCAG TTCAACCGAG CCGATTTCGG TATTGCCGCG ATTAGGTCAC
CATCAAATCA CTTCGTTATT ATCTGTGTCA GAGTTAACTG AGCTGGTCAG TCAGTCCCAA
TTGATCATAG ATACTCGGCA GCACTCAGAT TGGCGCACTT GTAGCGCAAT CGGCAGCGTG
ATTTGTTTAT CCCTCGCTTG GCCATCTGGG GCAAATTTTG GCTTTTTATG TTTTTACCAC
AACGAGGCGC ACGGCGTAGA TTCGAAAACG CTGCAGCTTG CAAAGCTTAT CAGCGATAGC
ATTCAACGCC AGTTAGGCGA GATATTGAGC CAGCACAGTG CGGCTGAAGC ATTAAGCCGA
GGTGCGCCAA GCTGTGTCGA TACGGTCGAT TTACAAACCT TTATCGATAG TTTTGAAGAA
CATATTTGGA TGAAAAATGC CGCTGGCATT TACACACTCT GTAATCGCAG CGTCGAGAAA
GCATGGGAAA TGCCCCGCAG TGAGATTGTC GGTAAATCCG ATGTCGAACT CTTTGGTGCT
GAAATTGCGA ATATTTTTCT AGAGGGTGAT AGGCTCGCTA TCGAGTCTGG CATGCCTATT
ATTGTCGCTG AGTGTTTAGA CGGCAATGAA GCTAAAAATC ATCTTTGGTT AGAAACGCTC
AAACTCCCAA CCTTAAATAC CCAAGGTGAG TTTGTGGGCG TTATCGGTAT GACTCGCAAT
ATTTCTAAGC ATAAAGCGGT TGAAGAACAA CTGACATTGG CGACCAATGT ATTTAAAAAC
TCGGTCGAAG GTGTGGTTGT GACCGACAGG CACGGCAATA TTACCGACGT AAATGGCGCA
TTTTTTGAGA TCACAGGTTA TGTGAGGGAA GAGCTGCTCG GTCAGAATCC ACGGATTTTT
AGCTCGGGTC GCCATGATAA AGCATTCTTC GACAAACTGT GGAATGCCCT GTTGGCTAAC
GGTAAGTGGA ATGGTGAAAT CTGGAATCGG CGTAAAAACG GTACTATTTT CCCGCAAAAT
ATCACCATAA GTACGATTTA TGATGAAGTC GGTGATGTGC GTTATTTTGT CGCTGTGTTT
GCCGATATTT CTGCCCAAAA AGAGAATGAA GCGCAACTCA CGCACTTAGC GTATTTCGAC
CCGCTAACGC ATTTGCCTAA TCGCATGAAG TTTATGATGC AGCTCAAACA AGAAGTACGG
CAAGCTAAGC GGCTGAATTT GCAGTTAGCG ACTGTGATGA TAGATGTCGA TTTGTTTAAG
CATATCAACG ACAGTTTTGG CCATAGCATA GGTGATGAAA TGCTGGTCGA GCTTGCCAAG
CGTTTACGCA GCCAAGTGGG CGATCAGGAT GTGTTATCGC GGATTGGTGG CGATGAGTTT
GTGGCGTTAA TTTCGGGGAT CGATAATAAC GAAGATGCCA CGGTTGCCAT TAATCAATTA
CGCCAAGTGT TTGAACAACC GTTTATTGTG AGCACAGGCG ATCACTTACG TTTGACCGCG
AGCATGGGCG TGTCTTTGTA TCCAAATGAT GGAACCGATG CGGACACTTT ACTGCGTAAC
GCCGATGCGG CCATGTATCG CGCTAAAAAT GATGGCCGCA ATAATTATGC TTTTTATACT
GAGTCCTTAA CGCAACAGTC TTTTGAACAT CTTAAGCTGC AAAGTGCCCT CTATGGCGCG
ATTGAGCAAA ATGCCTTGTA CTTGATGTAC CAGCCAAAAC TCGACTTAGT GTCTCGAAAA
ACCGTAGGAT TTGAAGCGCT GCTGCGATGG CACGATCCTC AACTGGGTTT AATTTCGCCC
GCGGTATTTA TACCCGTGGC AGAAAAAATT GGTCTTATCC ATGAGATCGG TTTATGGGTG
CTAGAAACCG CCTGTCGTCA GGGCATGCGT TGGCTTAGTG AAGGCAAACA CTTTGGCCGC
ATTGCGGTGA ACGTGGCCGG ACAACAGTTA CAGCGCAGCT CCTTTGTGGA TGATGTGAAA
CGTGTCTTAG CTGAAACGGG CTTACCCGCC AAACACTTAG AGCTTGAAGT GACTGAAAGT
GTGATGATGC AAAATCCCGA TCTTGCAATC CGTGACTTAA AGTTACTGGG TGATCTGGGC
ATAGAATTAT CGGTCGATGA CTTTGGGACC GGTTATTCAT CGCTGAATTA TTTGAAAAAA
CTACCCATCC ATAAGCTGAA GATTGATCAA TCCTTCGTGC GGGATATTCC CTTCGACACT
AACAATACCG CGATTGCTAA AGCTGTGATT GCGCTTGGAC ATGCGTTGAA GCTCGACATT
ATCGCCGAAG GAGTGGAAAC CAAAGAACAA GCCGATTTTC TGCAACAAAA TCAGTGTGAT
CAAGCCCAAG GTTATCTCTT TAGTCGTCCG CAACTACCAG AAGATCTCGA CGCATTTCTA
TCGTGA
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| Protein sequence | MMIDVPISQQ ELDNWLRDVN LVAEISNSKA ILIAWNAAGE LSSMLSSDSA AESEIQAILC
QLSGNHSAKT LPIATLSANT SSTATQSKAT PSTATPLKTT TSELTSNPSD TFETSVDAQL
AQEQLVSSTE PISVLPRLGH HQITSLLSVS ELTELVSQSQ LIIDTRQHSD WRTCSAIGSV
ICLSLAWPSG ANFGFLCFYH NEAHGVDSKT LQLAKLISDS IQRQLGEILS QHSAAEALSR
GAPSCVDTVD LQTFIDSFEE HIWMKNAAGI YTLCNRSVEK AWEMPRSEIV GKSDVELFGA
EIANIFLEGD RLAIESGMPI IVAECLDGNE AKNHLWLETL KLPTLNTQGE FVGVIGMTRN
ISKHKAVEEQ LTLATNVFKN SVEGVVVTDR HGNITDVNGA FFEITGYVRE ELLGQNPRIF
SSGRHDKAFF DKLWNALLAN GKWNGEIWNR RKNGTIFPQN ITISTIYDEV GDVRYFVAVF
ADISAQKENE AQLTHLAYFD PLTHLPNRMK FMMQLKQEVR QAKRLNLQLA TVMIDVDLFK
HINDSFGHSI GDEMLVELAK RLRSQVGDQD VLSRIGGDEF VALISGIDNN EDATVAINQL
RQVFEQPFIV STGDHLRLTA SMGVSLYPND GTDADTLLRN ADAAMYRAKN DGRNNYAFYT
ESLTQQSFEH LKLQSALYGA IEQNALYLMY QPKLDLVSRK TVGFEALLRW HDPQLGLISP
AVFIPVAEKI GLIHEIGLWV LETACRQGMR WLSEGKHFGR IAVNVAGQQL QRSSFVDDVK
RVLAETGLPA KHLELEVTES VMMQNPDLAI RDLKLLGDLG IELSVDDFGT GYSSLNYLKK
LPIHKLKIDQ SFVRDIPFDT NNTAIAKAVI ALGHALKLDI IAEGVETKEQ ADFLQQNQCD
QAQGYLFSRP QLPEDLDAFL S
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