| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1315 |
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| Symbol | |
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| ID | 5753043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1558017 |
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| End bp | 1560983 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641287585 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001553750 |
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| Protein GI | 160874434 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.243965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT GTAAACTCAG CGTCTTGACC ATGGCTCTCG CGACAGCAGG CTTTAGTGTG
GTGTATACAC CGCAGTTAGC CTTTGCAGCA GAGACTACGC CAACTCAACA GGAGGCCAAA
CAAGCTCAAG ACGACAATAT AAAAAACGAT ACCAACACGA ATACCAAGAG TGTCGAAACC
AACAAAAAAG CCAGCGATGA AGCGGCAAAT ATCGAACGTA TTGAGGTTAA AGGTTACAGC
AAAAGTCTGA TTGATTCCCT CGATGCTAAG CGTTACGGCG ACACAGTTTC AGAGCAATTA
TCGGCAGATG ATCTTGGCGC CTTACCCGAT GTATCAATGG CGGATGCGCT GACCCGCTTA
CCCGGTATTT CAGCGGTACG TACCGGTGGA CAAGCGGCGG AAATTAACAT TCGCGGTATG
TCTGGCGGTT TTGTTTTTTC AACCTTAAAT GGCCGTGAAC AGGTATCGAC GAGTGGTACT
CGCAGTATCG AGTTCGATCA ATACCCGTCT GAACTGATTT CATCCGCCGC TGTGTATAAA
TCCCCTAAAG CCTCACTCAT TGAAGGGGGC GTTGCAGGCA CAGTTGAACT GCAAACAGTC
AGCCCACTGC AATCCGATAA AGACCATAGT TTTCTGGTCA ATGCCCGTGG TATGTACAAC
GACAGAGCCA GTGAAGTGTA TGGTGCTGAC GAGTATGGCC ACAGATTGAG TATGTCTTAT
CAGGGTAAGT TCTTCGACGA TACCTTAGGC GTGGCGTTAG GTTATGCCCG TCTAAAACAA
CCCAGTGTTG CGACCCAATT TATCGGTTTG GCTTATAACG ACAGCAAAGA AGTTGATGGA
CTGGCTAATG ATAGCAACGG TCCTATTGAT GCCCCTGCGA ATGAGTACAT CAGCGAGGGT
TTTGAGCTAC AGCACCTTGG TGGCGTTGAA ATTCGTAACG GTTATATGGG CGCGATTGAG
TGGGCTCCTA GAGATAATTT TAAGCTCAAG GCCGATGCAT TTTTATCGCG TTTCGATAGC
GAATCGTTTG CCCGAGGATT CAGGGTTAAG TTTGGTGGCT CAGGCGCTGC GATTGCCAAT
CCTGTACTCG ATGGCAATTC TGTTATTGGC GGAACTTTTA ATCGTACCTC AAAAAGCTAT
ACCCGAGTTG AGACTGTAAA CGACGATAAC CAAGATTTTG ATGAAGTGAA TAGCTTTGGC
TTAAATGCTG ACTGGCAAGT GACAGACAGA CTGAATGTCG CCGCCGATAT TTCCTATTCC
TCAGCCAAAA GTAACTTTAG GAATGGCCTG TTATGGGCGA ACGTTGCTGT CGATGCTAAT
GCTGACACCC CAGTTTTCGA TGATAATGTC TCGATTAGTT ATCAACTTAA CGGGCTTAAT
CTGCCCGATG TGGGCTTTAA TCAAGCCGAT GCTTTCACCG ATCTGGATCG GGTGATGGTG
AGTAAGTACG GCATCTATCC CTATGAGAAT GAAGATGCGG TAAAGGCTTA TCGCCTTGAT
TTTAAATATG ACCTTGAGAA TGATTACATC AGCTCAGTAG AGTTTGGTGT ACGTTACTCT
GATCGCAATT ACTCCAATCG CCGCTCGGTA TTTGAATATG GCAATGATGG CGCTTTCTCT
AGCGCTGAGC CACCACTCAA GCTGACGTCT GATATGGCCT CGGTCGTCGA TTGGCAGGGT
GAGTTCAGTT ATTTCCCCTC TTATCTCGCC ATTGATCTCG ACGCTGCGCT AGCGGCTTGG
TTCCCTGAAG GTATCCCACA ACCAGTACAA ACCTGGGGAA ATGCCGATGG TGTACTCGAT
GCTAAGGGCT ATACCACTAA CTATTCTTGG ACCGTATTGC AAAGTGGGGA GGTGTTCGAA
AAGGTGTTTG CGGCTTATGC CATGGTTAAT TTTGATACCG AGATTGGTGG TATTCCAGTC
ACAGGAAATC TCGGTTTACG CCGTGTTGAA ACAGACCAAT CCGCAACTGT CTTAGAGAAT
GTCGGTGCAC ATCCAGAGCT TGGCGCTCAG TACATTGTCG ATGATTTAGG CATAGTAAAT
AACTACTATG CACCTAAAAT CAAAGGGATA GATTATGTTG ATTATCTACC GTCCCTTAAC
CTTAGTTTTA AGATCACTGA AGATTCTCAA ATCCGTTTAG CTGCCGCTAA AGTAATGTCG
CGTCCGCCCA TTAACCGCTT GGCGGGAGAT GCGAGCGCAA CGGCTAATAG CGATGGGGTC
ATCAATGGTT CCAGTACTAA TAACCCTTAT TTAAAACCTT TCTATGCGGA TCAATATGAT
ATTTCCTACG AGAAATACTT TGATGAAGGC GCCTTTGTCG CGGCGCTATT CTACAAAAAT
ATTGATTCTT TTATTGATAC TGTGGCTATC ACCAATTTCG ATTTTAAGGG GAATGGCTTC
AACGTGCCGG ATTACATCGT CGATCCTGTT ACTGGGGTGC AAACCTCAAC AAGTAATGGC
ACTTACACTA CTGCAATGAA TAATGCTGAG GGTGGATACA TTCGCGGTTT AGAGTTGGCT
TATACCCAAG TGTTTGCTTC CTTGCCCGAT TTATTTTCCG GTTTAGGTTT TAACGCCAGT
TATTCTTATA CCGAGAGTGA GGTGCAGTCC ATTACCAGCC TAGGCGGTGA TAGTGCTACT
CAATCTTTAC CTGGGTTATC GAATAATGTG TTCAGTGCAA CCTTGTTTTA TGGCTATGAG
GGCTTTGAAA CCCGTATCAG CGCTCGTTAC CGTGATGCTT TTGTCTCTGA ACAGGTGGCG
ATTAACGATC AAGTGGTGAA CTTCGATTCC GAAACCGTGA TGGACTATCA AGCCTCCTAC
CAAGTAACGG ACGGTTTAAA CGTACTGTTC CAAGTCAATA ACCTCACAGA TGAACCGACT
AAGAGTTACT TCGGCACCGA GCAGAAAACC GGCACCCTAC AGTACTTTGG CCGCGAATTT
TTCTTGGGGT TCACCTATGC CCTGTAA
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| Protein sequence | MRHCKLSVLT MALATAGFSV VYTPQLAFAA ETTPTQQEAK QAQDDNIKND TNTNTKSVET
NKKASDEAAN IERIEVKGYS KSLIDSLDAK RYGDTVSEQL SADDLGALPD VSMADALTRL
PGISAVRTGG QAAEINIRGM SGGFVFSTLN GREQVSTSGT RSIEFDQYPS ELISSAAVYK
SPKASLIEGG VAGTVELQTV SPLQSDKDHS FLVNARGMYN DRASEVYGAD EYGHRLSMSY
QGKFFDDTLG VALGYARLKQ PSVATQFIGL AYNDSKEVDG LANDSNGPID APANEYISEG
FELQHLGGVE IRNGYMGAIE WAPRDNFKLK ADAFLSRFDS ESFARGFRVK FGGSGAAIAN
PVLDGNSVIG GTFNRTSKSY TRVETVNDDN QDFDEVNSFG LNADWQVTDR LNVAADISYS
SAKSNFRNGL LWANVAVDAN ADTPVFDDNV SISYQLNGLN LPDVGFNQAD AFTDLDRVMV
SKYGIYPYEN EDAVKAYRLD FKYDLENDYI SSVEFGVRYS DRNYSNRRSV FEYGNDGAFS
SAEPPLKLTS DMASVVDWQG EFSYFPSYLA IDLDAALAAW FPEGIPQPVQ TWGNADGVLD
AKGYTTNYSW TVLQSGEVFE KVFAAYAMVN FDTEIGGIPV TGNLGLRRVE TDQSATVLEN
VGAHPELGAQ YIVDDLGIVN NYYAPKIKGI DYVDYLPSLN LSFKITEDSQ IRLAAAKVMS
RPPINRLAGD ASATANSDGV INGSSTNNPY LKPFYADQYD ISYEKYFDEG AFVAALFYKN
IDSFIDTVAI TNFDFKGNGF NVPDYIVDPV TGVQTSTSNG TYTTAMNNAE GGYIRGLELA
YTQVFASLPD LFSGLGFNAS YSYTESEVQS ITSLGGDSAT QSLPGLSNNV FSATLFYGYE
GFETRISARY RDAFVSEQVA INDQVVNFDS ETVMDYQASY QVTDGLNVLF QVNNLTDEPT
KSYFGTEQKT GTLQYFGREF FLGFTYAL
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