| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1309 |
|---|
| Symbol | |
|---|
| ID | 5753037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1550505 |
|---|
| End bp | 1553789 |
|---|
| Gene Length | 3285 bp |
|---|
| Protein Length | 1094 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641287579 |
|---|
| Product | peptidase S41 |
|---|
| Protein accession | YP_001553744 |
|---|
| Protein GI | 160874428 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00413627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.677768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GCCATTCTGT CGCCTGCTGC ATGCTTGCCC TAGGCACGTT CACTGCGGCC
CAAGCCATCG CTGCCGATGC GGTGAGCAAT CAAGGATATT ACCGCGCGCC AGCCCTGCAC
GATCAAACCT TAGTCTTTAC CGCTGAAGGG GATTTATGGA CTCAGACCTT AGGTCAAAAA
GCGGCGACTC GCTTAACGAG TTTACCCGCA GAAGAGCTAG GTGCGACCAT TTCCGCCGAT
GGCAAGTGGG TTGCTTATGT GGCCAATTAT GAAGGCGCGA GCGAAGTGTA TGTGATCCCG
GTTGCCGGCG GTGTGGCCAA GCGGGTGAGT TTTGAGAATA GCCGTGTGCG GGTTCAAGGT
TGGACCCCAA AAGGCGAGAT TTTATATTCC ACCGACAGTG GTTTTGGCCC CGCGAATAAT
TGGATGCTAC GCAGCGTCGA TCCTAAAACC CTCACGACCA CAGATTTACC CTTAGCCGAT
GCGGTCGAAG GTGTGATTGA TGAGCGCAAC GAATATGTGT ATTTCACCCG CTTTGGCCTG
CAAGTCACTG GCGATAACGC CAAAGTGTAC CGTGGCGGCG CAAAGGGCGA ATTATGGCGC
TTCAAGCTTG GTAGCAAAAC CGAAGCCCAG TTGCTCAGCG GCCAGCACGA CGGCTCAGTG
CGCCAACCTA TGCTATGGCA AGACAGACTC TATTTTATCA GCGACAGTGA TGGTAATGAC
AATCTCTGGT CGATGGCGCT CGATGGTTCA GACGCAAAAC AGTTGACCCA ATTTAAAGAT
TGGCAAGTCC GCGGCGCGCG GATGGATCAA GGCAAAGTGG TCTTCCAGTT AGGTGCGGAT
ATCCATGTAT TTGATGTTGC GGCCGCGAAA GACGCATTAC TCGATATCGA ACTCACGTCC
GATTTTGCCC AGCGCCGTGA GCACTGGGTG AAAGATCCTA TGGATTATGC ATCCTCTACC
GATTTAGCCC TTGCTGGCGA TAAAGTGGTG ATCACCGCCC GCAGCCATGT GGCTATTGCG
GGTGTTGATG GTTCGCGCTT AGTGCAAGTT GCGCTGCCGG GGACTTATCG AGTTAGAAAC
GCGATTATGA GTCAAGATGG CAAGTCGGTT TATGCGCTTA GCGATATGAC AGGCCAACAG
GAAATTTGGC AATTCCCCGC CGATGGCAGC AGTGGCGCTA AGCAGCTGAC GAAGGACGGC
CATACCTTAA GAATGAGTTT GAATCTGTCC AATGACGGTC GATTTATCGC CCACGACGAT
AACGATGGCA ATGTTTGGTT GCTCGACTTA AAGAAAAATA CCAATCAGAA AATCATCACT
AACGGCGAGG GACTTGGACC TTATGCTGAT ATTCGCTGGT CCGGAGACAG CCGTTTTATC
GCATTAACTA AGTCAGAAAT CGGTAAACAA AGACCGCAAA TCGTCCTTTA CTCTGTGGAT
GAAAATAAGG TCGAGACGCT CACCAGTGAT AAGTACGAAT CCTATTCGCC AACCTTTAGC
AGTGACGGTC AGTGGCTATA TTTCCTGTCA AATCGCCAAT TTAGTGCTAC GCCAAGTTCA
CCTTGGGGCG ATAGAAACAT GGGCCCAGTG TTTGATAAAC GCAGCCAAAT TTTTGCCATC
GCCTTAGTTA GCAATGCCAA ATTTCCCTTT AGTAAGCCCA ATGAACTCAG TGTTAACCAA
GCCGACAAAA CCGATGCTAA AGATAAGCCG GAACCGGTGA AAATTGATTG GTCAGGTATT
TCGCAGCGCT TATGGCAAGT ACCTGTCGAT TCAGGCAATT TCAGTGAACT GCGCGCCGTC
GATGGCAGAC TTTATGTGCT TGATCAAGCA ATGGGTGATG ACGCGGAACC AAGCCTGATG
ACCATCAAGT TTGATCCATT GAGACCTAAG GCCGAGGTTT TTGCCGAAGA TATTGGTCAT
TATGCGGTTT CTGCCGATGG CAAAAAGCTG ATGCTAAGAA AGTTCAGCAA TGACAAGGCG
CTGATGATTG TTGACTGTGG CGATAAGCTT GGCGATACCG ATAATGCCAA AGTGCAAACG
GATCAATGGC AATTAGCGAT TTCTCCCCAG CTTGAATGGC AACAAATGTT TGAAGATGCT
TGGTTGATGC ACAGGGAATC TTTCTTCGAT AAGAAGATGC GCGGCCTCGA TTGGCAAGCG
ACCAAAGCTA AGTATCAACC TTTGCTCGAC CGCCTGACTG ACCGTAATGA ACTGAACGAT
ATCTTTATGC AAATGATGGG CGAATTAGAT TCATTGCATT CACAGGTTCG CGGCGGTGAT
TTACCTAAAG ATCCCGATGC GGCTAAAGCG GCAAGTCTTG GTGCGCGCCT ACAGCAAACT
GCAGATGGCG TTAAAATTGC GCACATTTAC AGTAACGATC CTGAGTTGCC CGCTAACGCA
TCACCGTTAA ATCGTATCGA AGTCGATGCC AAAGAAGGCG ATGTGTTGTT AGCTATCAAT
GGCACGCCAG TGGCGAACGT GGCCGATGTC ACGCGTCTGT TACGTAATCA ACAGGACAAG
CAAGTATTGC TGCAACTTAA GCGTGGCAGC AAAACCCACA AAACTATCGT CATGCCTGTT
AGCGCTATGG TGGATGGCCA GTTACGTTAC TTAGATTGGG TGAGCCATAA CGCGGCTGTG
GTCGAGGATG CGAGTAAGGG CAAGATTGGC TATTTGCACT TATATGCGAT GGGCGGCGGC
GATATAGAAA GTTTTGCCCG TGAGTTTTAT ACCAATTATG ATAAAGACGG TTTGATTATC
GACGTTCGCC GTAACCGCGG CGGCAATATC GACAGTTGGA TTATTGAGAA GTTATTGCGC
CGCGCTTGGG CGTTTTGGCA ACCGACCCAC GGCACGCCAA ACACCAATAT GCAGCAAACC
TTCCGCGGCC ATTTAGTCGT GTTAACCGAT GAGCTGACTT ATTCCGACGG TGAGACCTTC
TCCGCTGGGA TTAAAGCGCT GGGTATTGCA CCGCTAATTG GCAAGCAAAC GGCAGGGGCG
GGCGTGTGGT TATCTGGGCG AAACTCGCTG ACCGATAAAG GAATGGCGCG GGTGGCCGAG
TATCCACAGC ATGCAATGGA TGGTCGTTGG GTGCTAGAAG GGCATGGCGT AACGCCGGAT
ATCGAAGTTG ATAACTTACC TTTTGCGACC TTTAACGGTA AAGATGCACA GCTTGAGACG
GCAATAAGCT ATTTAAAGGA TGAATTGGTT AAGCAGCCCG TTCCAGCCTT AAAAGCGCAG
CCTATGCCGG CAAAAGGAAT GGCACAGGAT ATAAAAGCTA AGTAA
|
|---|
| Protein sequence | MKLRHSVACC MLALGTFTAA QAIAADAVSN QGYYRAPALH DQTLVFTAEG DLWTQTLGQK
AATRLTSLPA EELGATISAD GKWVAYVANY EGASEVYVIP VAGGVAKRVS FENSRVRVQG
WTPKGEILYS TDSGFGPANN WMLRSVDPKT LTTTDLPLAD AVEGVIDERN EYVYFTRFGL
QVTGDNAKVY RGGAKGELWR FKLGSKTEAQ LLSGQHDGSV RQPMLWQDRL YFISDSDGND
NLWSMALDGS DAKQLTQFKD WQVRGARMDQ GKVVFQLGAD IHVFDVAAAK DALLDIELTS
DFAQRREHWV KDPMDYASST DLALAGDKVV ITARSHVAIA GVDGSRLVQV ALPGTYRVRN
AIMSQDGKSV YALSDMTGQQ EIWQFPADGS SGAKQLTKDG HTLRMSLNLS NDGRFIAHDD
NDGNVWLLDL KKNTNQKIIT NGEGLGPYAD IRWSGDSRFI ALTKSEIGKQ RPQIVLYSVD
ENKVETLTSD KYESYSPTFS SDGQWLYFLS NRQFSATPSS PWGDRNMGPV FDKRSQIFAI
ALVSNAKFPF SKPNELSVNQ ADKTDAKDKP EPVKIDWSGI SQRLWQVPVD SGNFSELRAV
DGRLYVLDQA MGDDAEPSLM TIKFDPLRPK AEVFAEDIGH YAVSADGKKL MLRKFSNDKA
LMIVDCGDKL GDTDNAKVQT DQWQLAISPQ LEWQQMFEDA WLMHRESFFD KKMRGLDWQA
TKAKYQPLLD RLTDRNELND IFMQMMGELD SLHSQVRGGD LPKDPDAAKA ASLGARLQQT
ADGVKIAHIY SNDPELPANA SPLNRIEVDA KEGDVLLAIN GTPVANVADV TRLLRNQQDK
QVLLQLKRGS KTHKTIVMPV SAMVDGQLRY LDWVSHNAAV VEDASKGKIG YLHLYAMGGG
DIESFAREFY TNYDKDGLII DVRRNRGGNI DSWIIEKLLR RAWAFWQPTH GTPNTNMQQT
FRGHLVVLTD ELTYSDGETF SAGIKALGIA PLIGKQTAGA GVWLSGRNSL TDKGMARVAE
YPQHAMDGRW VLEGHGVTPD IEVDNLPFAT FNGKDAQLET AISYLKDELV KQPVPALKAQ
PMPAKGMAQD IKAK
|
|---|
| |