| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1305 |
|---|
| Symbol | |
|---|
| ID | 5753033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1545951 |
|---|
| End bp | 1546913 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641287575 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001553740 |
|---|
| Protein GI | 160874424 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGA CCGTTTACGC TCCAGCCTCT ATGGGTAACG TGGGAGTCGG ATTTGATTTA
CTGGGCGCCG CTTTGGCGCC TATCGATGGC AGTTTACTCG GCGACAGAGT GACTATCGCG
GCGGCAGAAT CGGGTGTGAG TCTGGCGCAA ACCGGTGCTT GGGCCCATAA ACTGCCTGAA
AATCCGCAAG ACAATATAGT TTACCAATGT GCCGAATTCT TCTTAACCGC CCTGAGTAAG
GAGTATTTAG ACGCGATTGG TAAAGCAGAT GAAGGCGTAG CGCTGACACT GGAAAAGAAC
CTGCCCGTCG GCAGTGGTTT AGGTTCGAGT GCAAGCTCAG TCGTGGCGGC GTTATATGCA
CTGAATGAAC ATTTTGACAG ACCTTATAAC GAGCAAGCAC TGCTGGAACT GATGGGCGAG
TTTGAAGGTA AGATCAGCGG CAGTGTGCAC TATGACAACG TCGCCCCCTG TTATTTGGGC
GGCATGCAAT TGATGCTCAA TGTGCCGGGC ACTGTATGTG AAGCGATACC GAGTTTTAAA
GAATGGTATT GGGTTGTGGC CTATCCTGGG ATTTCACTTT CGACGGCGAT GATGCGTAAA
CTCATGCCTG ATCAATACGA TAAAAGTGTC ACTATCGATT TTGGCCGCTA TTTAAGTGCC
TTTGTACATG CCTCTTATCA GCAGAATGCC AAGCTTGCGA TCAGCGTATT AAAAGATGTG
TTAGCCGAGC CTTATCGCGC AGCTGCGATT CCGGGTTACG ACAATGCCAG AGTTGCTTTA
GCCGATTTAG GCATGTTGAC TACGGGGATT TCCGGCAGTG GTCCAACGCT GTTTTCGATT
ACCGATGATT TAGCCACGGC AAATGCGGCT AAAACCTGGT TAGAACAGCA TTATTTAACC
GAGGTGGGTG GCTTTGCCCA CGTGTGTCGC CTCGATGAGC AAGGCACGCG TAGAGTCGAT
TAA
|
|---|
| Protein sequence | MSLTVYAPAS MGNVGVGFDL LGAALAPIDG SLLGDRVTIA AAESGVSLAQ TGAWAHKLPE
NPQDNIVYQC AEFFLTALSK EYLDAIGKAD EGVALTLEKN LPVGSGLGSS ASSVVAALYA
LNEHFDRPYN EQALLELMGE FEGKISGSVH YDNVAPCYLG GMQLMLNVPG TVCEAIPSFK
EWYWVVAYPG ISLSTAMMRK LMPDQYDKSV TIDFGRYLSA FVHASYQQNA KLAISVLKDV
LAEPYRAAAI PGYDNARVAL ADLGMLTTGI SGSGPTLFSI TDDLATANAA KTWLEQHYLT
EVGGFAHVCR LDEQGTRRVD
|
|---|
| |