Gene Sbal195_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1292 
SymboltyrA 
ID5753020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1529001 
End bp1530152 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content48% 
IMG OID641287562 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_001553727 
Protein GI160874411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0548711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCAG GTATGAATGA AAAAACAACG GCCGAATTAG AACATCTTCG CGGCCTGATT 
GATGGTGTCG ATCAGCAATT ATTGCATTTA CTGCGTAAGC GCTTGGATCT CGTGGCGCAA
GTGGGCACAG TGAAACACGG CGCCGGTTTA CCGATTTATG CGCCGCAGCG TGAGGCTGCC
ATGCTCGCCA AACGCCGTGA AGAAGCGAAA AATATGGGGA TTGCACCGCA ATTAATTGAG
GATATTTTAC GACGCTTGAT GCGCGAGTCT TACCTCAATG AAAAAGATGT TGGTTTTAAG
CAAGTTAAAA AAGATCTCGG CTCAGTGGTG ATTGTCGGCG GTAAAGGGCA ACTCGGTGGA
CTGTTTTCAC AAATGCTGAC CTTATCTGGC TACCAAGTGA ATCTGCTCGA TAAAGACGAT
TGGCAGCAAG CAGATAGCCT ATTTGCCGAT GCGGGCATGG TGTTAGTGAC AGTGCCAATA
GCGATTACTT GCGAGCTTAT TCGCGAAAAG CTGAGCCAAT TACCGGCAGA CTGCATTCTG
GCAGATTTGA CCTCCATTAA GACTGAGCCG GTTAACGCTA TGCTTGAGGC GCATTCTGGT
CCGGTTGTAG GTTTTCATCC TATGTTTGGT CCCGATGTGG GCAGTCTGGC GAAGCAAGTC
GTGGTGGTGT GCCACGGACG TGAGCCTGAT AAATACCAAT GGTTACTCGA GCAGATCGCA
ATATGGGGCG CGCGGATTGT CGAAGCAGAG CCTGAACGTC ACGACAGTGC GATGCAGTTA
GTGCAGGCAA TGCGTCACTT TTCGACCTTT GTGTATGGTT TGAATCTGTG CAAGGAAGAG
GCAGATATTG ATACTTTACT GCAATTTAGC TCGCCTATTT ACCGCTTAGA ATTGGCTATG
GTCGGGCGAT TATTCGCCCA AAGCCCAGAG CTTTACGCCG ATATTATTTT TGCTCAGCAA
GATAGCCAAC ATGCAATCGG CGATTACTTA GATAACTACC GTGAAGCGTT GGAGCTGCTA
AAACGCGGTG ACAGGGACGA GTTTATTAAG CAGTTCCAAA CCGTCGCTAA ATGGTTTGGG
GATTTTGCTC CCCAATTTCA GCGTGAAAGT CGTATTATGC TGCAATCGGT AAATGATATG
AAAACCAATT AA
 
Protein sequence
MDSGMNEKTT AELEHLRGLI DGVDQQLLHL LRKRLDLVAQ VGTVKHGAGL PIYAPQREAA 
MLAKRREEAK NMGIAPQLIE DILRRLMRES YLNEKDVGFK QVKKDLGSVV IVGGKGQLGG
LFSQMLTLSG YQVNLLDKDD WQQADSLFAD AGMVLVTVPI AITCELIREK LSQLPADCIL
ADLTSIKTEP VNAMLEAHSG PVVGFHPMFG PDVGSLAKQV VVVCHGREPD KYQWLLEQIA
IWGARIVEAE PERHDSAMQL VQAMRHFSTF VYGLNLCKEE ADIDTLLQFS SPIYRLELAM
VGRLFAQSPE LYADIIFAQQ DSQHAIGDYL DNYREALELL KRGDRDEFIK QFQTVAKWFG
DFAPQFQRES RIMLQSVNDM KTN