| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1291 |
|---|
| Symbol | |
|---|
| ID | 5753019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1527894 |
|---|
| End bp | 1528985 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641287561 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001553726 |
|---|
| Protein GI | 160874410 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000443316 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAG ATACGATTAA CAACGTACAC ATCAGTTCAG AGAAAGTTTT AATCACGCCG
CAAGAGCTTA AAAATGCCTT GCCACTCTCT GAGCATGCTT ATCGTTATAT CCTCAATGCC
CGCAAAACCG TGGCTGATAT CGTCCATAAA CGCGACAATC GAGTATTGAT CGTCACTGGG
CCTTGTTCCA TCCATGATAT CGCCGCCGCT AAGGAATACG CTTTAAGGCT TAAAACCCTG
CACGATGAAC TCAGTGATGA GTTTTACATC TTAATGCGAG TGTACTTTGA AAAGCCGAGG
ACTACGGTAG GTTGGAAGGG CATGATCAAC GATCCCGATA TGGATGAATC CTTCGATGTC
GAAAAAGGCC TGAAAATGGC CCGTGAGCTG ATGATTTGGT TGGCCGAATT AGGGCTACCA
GTCGCCACTG AAGCGCTTGA TCCTATCAGC CCTCAGTACA TTTCTGAGCT AGTGACTTGG
TCGGCCATTG GTGCCCGCAC CACAGAATCG CAAACCCATA GGGAAATGGC ATCGGGCCTG
TCTATGCCGG TGGGCTTTAA AAATGGCACC GATGGTAAGC TCGATGTCGC GATTAATGCG
CTAAAATCAG CGGCCAGCAG TCACAGATTT ATGGGCATTA ACCAACAGGG CCAAGTCGCC
TTATTACAAA CTGCGGGCAA CCCCGATGGT CATGTGATTT TACGCGGCGG TGCAACACCA
AACTACGATG CCGCAAGCGT GGCAGAATGT GAGGCGCAGC TTCATAAAGC CAAACTCAAT
GCACGTTTGA TCATCGATTG CAGCCACGGC AATTCATCAA AAGACTACAG CCGCCAAAAG
CCTGTGTGTG AAGATGTGTT CGAGCAGATT TATAACGGCA ATAAATCGAT CATCGGCGTT
ATGCTTGAAA GCCATTTAAA TGAAGGCAAC CAAAGCTGTG ATAAGCCATT AAGCGAGTTA
GCTTACGGTG TATCTGTGAC AGATTCCTGT ATTAACTGGG AAAAAACAGA AACTATTTTA
CGTGACGGCG CGGTGAAGTT ATCTTCAATA CTCCCGGCAC GCTTCGATAT GCTTAAAGTA
GCTAACGCTT AA
|
|---|
| Protein sequence | MQQDTINNVH ISSEKVLITP QELKNALPLS EHAYRYILNA RKTVADIVHK RDNRVLIVTG
PCSIHDIAAA KEYALRLKTL HDELSDEFYI LMRVYFEKPR TTVGWKGMIN DPDMDESFDV
EKGLKMAREL MIWLAELGLP VATEALDPIS PQYISELVTW SAIGARTTES QTHREMASGL
SMPVGFKNGT DGKLDVAINA LKSAASSHRF MGINQQGQVA LLQTAGNPDG HVILRGGATP
NYDAASVAEC EAQLHKAKLN ARLIIDCSHG NSSKDYSRQK PVCEDVFEQI YNGNKSIIGV
MLESHLNEGN QSCDKPLSEL AYGVSVTDSC INWEKTETIL RDGAVKLSSI LPARFDMLKV
ANA
|
|---|
| |