Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1273 |
Symbol | |
ID | 5753001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1512068 |
End bp | 1512694 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287543 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_001553708 |
Protein GI | 160874392 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.187319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAAAT TAGGTCAAGA ATGGGTATCT GCCGCAGTCG ATGGAGAGAC TGATGCGCAG ACCATGGCAG AGTTATCTGC TGATACACAT TCACATGATA AATGGCATAA CTATCATATG ATAGGCGATG CCATGCGTGG CGAGTTGCCG CAGAATATTG TGTTAGATCT CTCTGCTAGC ATTGCCGCCG CCATTGAGCT TGAGCCAGCG ATAGTTGCGC CTAAGCATCA TGCGTCTAAG GTTGCTGCAC CTGTAACCCC GCAAATTGCC GCCAATGCGC AGCAAAACCG CGTCGTACCT TTGTTTAAGC AATTTGGCCA ATATGCCATT GCTGCGACGG TTGCTATGTT TGCGATTGTT GGTGTGCAGA ATTACAATCA GAGCGCCGAT GATGCCGCGT CACCATCGCC CGTATTGATT ACCAGACCGC TAATTGGTAG CGCATCACCT GTGAGCCTAC AAACGGGTCC AGTTCAACAG AATCAAGGTT ATACCAATGA TCAGGTGAAC GAGCAGCGTC GCCGAATTAA TACTTATATT CAAGATCATA TGTTGCAACA ACGATTGAAT ACCGGTGCGG TTGTAGAGGA CAATACCGAG GTCGTACCCG TTCCGGTCAA TCAATAA
|
Protein sequence | MDKLGQEWVS AAVDGETDAQ TMAELSADTH SHDKWHNYHM IGDAMRGELP QNIVLDLSAS IAAAIELEPA IVAPKHHASK VAAPVTPQIA ANAQQNRVVP LFKQFGQYAI AATVAMFAIV GVQNYNQSAD DAASPSPVLI TRPLIGSASP VSLQTGPVQQ NQGYTNDQVN EQRRRINTYI QDHMLQQRLN TGAVVEDNTE VVPVPVNQ
|
| |