| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1260 |
|---|
| Symbol | |
|---|
| ID | 5752988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1499526 |
|---|
| End bp | 1500197 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641287530 |
|---|
| Product | DNA mismatch repair protein |
|---|
| Protein accession | YP_001553695 |
|---|
| Protein GI | 160874379 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3066] DNA mismatch repair protein |
|---|
| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000473996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.12603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAA TTATTCCCCC CGAAAACCTC CCTGAGCTAC TCGAGCGCGC CCATATGATG
GCTGGCGTGA GTTTAGCGCA AATTGCCGCC CAAAGAGGCT TAAATGTTCC CAAGGATCTT
AAGCGGGATA AAGGCTGGGT CGGCCAATTA ATCGAAATGG AACTGGGCGC GACGGCGGGG
TCGAAACCTG AGCAAGATTT TCTGCACTTA GGTGTTGAGC TTAAAACTAT CCCCATCGAT
TCACAGGGAC GACCATTGGA GACCACTTAT GTCTGCGTGG CGCCGCTGTC GAATATCCAA
GGGTTAACCT GGCAAAACAG CTTAGTCTGC CATAAGTTAC AGCGCGTCCT TTGGGTACCC
GTTGAAGGTG AGAGGCATAT TCCTGTGGGA GAGCGCCGTA TTGGCACCCC GATATTGTGG
GAGCCTGATC CACAGGAGTT GCAATTACTG CAACAGGACT GGGAAGAGAT CATGGAGCTT
ATCGCCCTCG GCAAAGTCGA AAAACTCACC GCACGCCACG GCGAAGTACT GCAATTACGT
CCCAAAGCCG CCAACAGTAA AGCATTAACG CAAAGCATTG CCGAAGATGG CAGCCTCAAA
ATGACCAACC CTAGGGGTTT TTATTTAAAG ACCAGTTTCA CCGCCATGAT ACTTAATAAG
GTTTTTGGTT AA
|
|---|
| Protein sequence | MNRIIPPENL PELLERAHMM AGVSLAQIAA QRGLNVPKDL KRDKGWVGQL IEMELGATAG
SKPEQDFLHL GVELKTIPID SQGRPLETTY VCVAPLSNIQ GLTWQNSLVC HKLQRVLWVP
VEGERHIPVG ERRIGTPILW EPDPQELQLL QQDWEEIMEL IALGKVEKLT ARHGEVLQLR
PKAANSKALT QSIAEDGSLK MTNPRGFYLK TSFTAMILNK VFG
|
|---|
| |