| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1253 |
|---|
| Symbol | |
|---|
| ID | 5752981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1488076 |
|---|
| End bp | 1488786 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641287523 |
|---|
| Product | adenosylhomocysteine nucleosidase |
|---|
| Protein accession | YP_001553688 |
|---|
| Protein GI | 160874372 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.190743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG GAATTATTGG CGCAATGGAG CCAGAAGTCG CTCACCTGAT CGCCGCCATG
ACAAATGCGA CATCGCAAAC TATTGCTGGT ATTGAATTTA TTGCTGGCAC TCTTGCGGGT
AAAGACGTTG TCGTAACTCG CTCTGGCATA GGTAAAGTGG CCGCAAGTAT TGCGACCACA
CTGCTCATCG AAAAATATGC GCCGGATGCA GTGATCAACA CAGGTTCTGC CGGTGGTTTT
GTCGATACGC TGGCCATTGG CGATATCGTG ATTTCTTCTG AAGTGCGTCA CCACGATGTG
GATGTCACCG CCTTTGGCTA CGAAATTGGC CAAATGGCGC AGCAACCTGC TGCGTTTATC
CCAGCCGCTC ATTTAGTTGA AGCCGCCAAC AAGGCCATTG CTCAACTAGG CGAAGTCAAA
GCGATTGAAG GGTTGATCTG TACTGGTGAT AGCTTTATTT GCGATCCTGT TCGCACCCAA
GCCATGTTGA AAAACTTCCC AACGATGGCC GCCTGTGAAA TGGAAGGCGC TGCAATCGCT
CAAGTTTGTC ATCAATTTGG TGTGCCATTT GTGGTGATCC GCTCTTTATC GGATAACGCC
AACAATGACT CGCCAGTGGA TTTTGATTCT TATATTGTCA AAGCGGGTTA CCACTCAGCG
CTGATGGTGA TGCTGCTACT TGAGCAACTG AATCCTAGCG CAGTAAAATA A
|
|---|
| Protein sequence | MKIGIIGAME PEVAHLIAAM TNATSQTIAG IEFIAGTLAG KDVVVTRSGI GKVAASIATT
LLIEKYAPDA VINTGSAGGF VDTLAIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFI
PAAHLVEAAN KAIAQLGEVK AIEGLICTGD SFICDPVRTQ AMLKNFPTMA ACEMEGAAIA
QVCHQFGVPF VVIRSLSDNA NNDSPVDFDS YIVKAGYHSA LMVMLLLEQL NPSAVK
|
|---|
| |