Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1250 |
Symbol | |
ID | 5752978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1486006 |
End bp | 1486632 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287520 |
Product | hypothetical protein |
Protein accession | YP_001553685 |
Protein GI | 160874369 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.367053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.185993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGT GGATCTACTT TTTTGATTTA TGGGGTACCG CTGTATTTGC GCTATCTGGC GCACTCGCCG CAGGGCGTCA TAGAATGGAC CCCTTTGGCG TCATAGTGCT CGCCTCGGTC ACAGCTGTGG GCGGCGGCAG TATTCGGGAT GCCTTAATTG GCGCAACACC TGTGTTTTGG ATCCGCGATC CCAATTACAT CATAGTGATT CTCGCAACTG TGCTCGCCTG TTTGCTGTTA GTGCGTCGGC CTCGCAAGGT GCCTGAATAT ATTTTGCCGG TCGCCGATGC CTTTGGATTA GCCTTGTTTA CTGTGATTGG TGCCGAAAAA GCCCTCAATA TGGGCTTGAG TGGCATGATT GCCGTGGTAA TGGGCTTGAT CACAGGCGTG GGAGGAGGCA TTATTCGAGA CTTACTGTGC AGACAAGTTC CTATGGTGTT ACGTACAGAA GTCTATGCCA CAGCTTCAAT CATAGGTGGT ATCGGCTATA CCGTGAGTTT AGCCTACGGT ATGGGCGAGA AAACGGCGCT GTTTCTGGCG ATGACCAGTG CTCTATTTAT CCGCTTAAGC GCCATCAAGT GGCATCTGTC GTTACCGGCC TTTGATCTCA AAACCAAGAG GGAATAG
|
Protein sequence | MSQWIYFFDL WGTAVFALSG ALAAGRHRMD PFGVIVLASV TAVGGGSIRD ALIGATPVFW IRDPNYIIVI LATVLACLLL VRRPRKVPEY ILPVADAFGL ALFTVIGAEK ALNMGLSGMI AVVMGLITGV GGGIIRDLLC RQVPMVLRTE VYATASIIGG IGYTVSLAYG MGEKTALFLA MTSALFIRLS AIKWHLSLPA FDLKTKRE
|
| |