| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1230 |
|---|
| Symbol | |
|---|
| ID | 5752958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1464712 |
|---|
| End bp | 1465554 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641287500 |
|---|
| Product | ribosomal RNA large subunit methyltransferase A, putative |
|---|
| Protein accession | YP_001553665 |
|---|
| Protein GI | 160874349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.706376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.528023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTCG AATATCAGTG TCCAACCTGC GGACTTGCGT TAAAACAACA CAAAGCCTCC
CAAGGTTTTT ATTGTGTCAA TAAGCATCAC TTCGATCGGA ATGAGCAAGG TTATTGGGTT
TTTACTAAGC CACAACGCCA AAAGCCGACT GGTGATTCGC GCGAGCAAGT TAGAGCTAAG
CGTTTTCTAC TCGAATCAGG CATATTTTCG CCTTTGATCG ATAAACTGGC TGAGATAATC
ACTGGATCTA TTACGCCTGA TGCTTGTTTA TTGGATTATG AATGCGCTGA GGGCTTCTTC
TTGCGTGCTT TAGCTTCCAA GCTGGCTGAG GTCGAAAATC CGCTAAACGT CCAGTACGTG
GGCGTAGCGG ACGCAGAAAA TGCTATTTTT GCTGCAGCGA AGGCGCAGAC TCCTGGGATC
TTGTGTTTAA GCTCTTCTAA AAAATTACCC TTTATCGATA ATTGTGTGGA TTTTATTACT
GTTATTGATC GGCCGTTAAA GGGAAAAGAG TCTGTTAGGA TATTGAAAGA CGATGGGACC
ATGTTACTGG TTATGCCTGG GCCACGACAC CTATGGCAAC TCAGGGAATA TATTTATCCT
GACTTGGCTG AAAAACCTTT CAAAGTGAAT TTGCCCTCTG CATTATCGGT AAAAGACACT
CAGGCACTGA GCTTCACTTT ATCTGTTACC GGTGAGCAAG CATTAACGCT ATTGGATATG
GCGCCTTATG CGTGGCGTGC AACTGACAAG ATGAAGCACG ATATTCAAGC TAATCATTTT
GAGTCGTTGG AAATTGACTA TGTATTAGTC TCAGCACATA AACGCGTGGT TGAATCGCTA
TAG
|
|---|
| Protein sequence | MGLEYQCPTC GLALKQHKAS QGFYCVNKHH FDRNEQGYWV FTKPQRQKPT GDSREQVRAK
RFLLESGIFS PLIDKLAEII TGSITPDACL LDYECAEGFF LRALASKLAE VENPLNVQYV
GVADAENAIF AAAKAQTPGI LCLSSSKKLP FIDNCVDFIT VIDRPLKGKE SVRILKDDGT
MLLVMPGPRH LWQLREYIYP DLAEKPFKVN LPSALSVKDT QALSFTLSVT GEQALTLLDM
APYAWRATDK MKHDIQANHF ESLEIDYVLV SAHKRVVESL
|
|---|
| |