| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1177 |
|---|
| Symbol | |
|---|
| ID | 5752904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1394521 |
|---|
| End bp | 1397319 |
|---|
| Gene Length | 2799 bp |
|---|
| Protein Length | 932 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641287447 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_001553613 |
|---|
| Protein GI | 160874297 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0322091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA CACTCTCAGC AAGCGCCATT TTACTGGCTT TAGGATTAGC GGCCTGTTCC
GAGGCGCCAG TGACGCCTTC CTCTGCGTCA GCCAATAAGG CTGTGACTCA AACACAGCAA
GCTCAGGACG CATTAACTCA AGCGCAGTTA CAACAACTCG GGGATTCGTT AGTCGTAACT
TACCGTGTTG TGACCAATGT GCCAGACGAT AAGTGCCTAA AAGATAAAGC CGATGGTCGC
TGTTTTGTCG CTCAAATTGA TTTCGTGCCC GGTATGGATT TAGCCAGCCA GGATTGGGAA
ATTTATTTAA GCCAAATGCG CCCAGTGCAA TCGGTTGAAA GCGGTGAGTT GACGATAACG
CACGTTAAAG GCGATTTACA TCGTATTACG CCAACGGCCG CTTTTAAGGG ATTTGTTAAG
GGCGAGAAAA AGCAACTGAC ATTCCGTGGT GAGCCGTGGC AATTGGCTGA AACCGACGCT
ATGCCAAACT ATTACCTCGC AGCAAACGGA TTAGAACCCG TCATTATCGC CAGCACTCAA
GTGGGTAAAG ATGCCGAAAC GGGTTTAGAG ACGCGTCCGT ATGTTGAAGG GTTTACGAAT
TTTAAAACCC AATATCAACG CACTGAAACG GATAAACTCG CGCCAGCCGA TGCCGCGCAA
TTATTTAAAG CCAATCAAAG CGTGAGTGAA GATGCCGCCT TGGCTGTGGA TACCATTATC
CCAACGCCAC AAAAGGTGAA GATCCATTCA ACTGATACAC CAGTATCCCT TGCTGGCGGT
ATTAAGGTCG AATATCAGCA AGATAACCCA GAGCAAAAGA GTCAAGTTGC GGCAGCGGTG
GCACGTTTAG CTCGCCTGGG TGTGGCTGAA TCTGCGAGTG GCATTACGGT GAAATTTGCC
AGCCAAAAAG GGGATGAGGG CAGTTATCGC TTAGATATTC AGCCAACTGA AATAGTGATC
GCTGCCAATG ATGCGGCGGG CTTCTCTTAC GGTTTGTCAT CATTAGCAAG CCTTGTGGAT
GTGAATTCGC TGAAAGTGAA TGCCATGACC ATTGAAGACA GCCCACGTTA TCCGTTCCGT
GGTATGCACA TTGATGTGGC ACGTAATTTC CACAGCAAAC AATTGTTGCT GGATTTGCTC
GACCAAATGG CGGCTTATAA GCTCAATAAA CTGCATTTAC ACATGGCTGA CGATGAAGGT
TGGCGTTTAG AAATCGATGG TCTGCCTGAA TTAACCGACA TTGGCAGTAA ACGTTGCCAT
GATTTAGATG AAAATTCCTG CTTATTACCG CAGTTAGGCA GTGGGCCGTT TGGCGATACT
AGTGTTAATG GCTATTACAC CAAACAAGAC TATATCGACA TAGTGAAATA TGCCGAGGCG
CGTCAAATTC AAGTGATCCC ATCGATGGAT ATGCCGGGTC ATAGCCGCGC CGCGATTAAA
GCGATGGATG CGCGTTTTCG TCGATTACAG TCTGAAGACG TAGAGCTTCA AAACACGGGC
AAAGTGCAGG TTGTCCCTGT GCAGGAAACG GTAAATCAAG CTAGCACAGC GGTAAAAGCG
TTAGATGCGG GCGCTCGTCA ATTGCAAGCT GAAGGGAAAA CCACTGCAGC TGAGCAATAT
TTGTTATCCG ATGCAAACGA CAAAACGGTT TATTCTTCAG TGCAATATTA CGACGACAAT
ACGCTTAACG TGTGTATGGA GTCGACCTAT CAGTTTGTCG ATAAGGTAAT TGATGAAATT
GCCAAGTTAC ACCAAGCCGC GGGTCAACCA TTGACGCGTT ACCACATTGG TGCCGATGAA
ACGGCGGGAG CTTGGAAACA ATCACCCCAG TGTTTAGCAT TTGTCGCCAA TAACGATAAA
GGCGTTAAGT CGATAGATGA CTTAGGCGCT TATTTTATCG AGCGAATTTC GACTATGTTA
GCGGCCAAAG GTATTGAAGC TGCGGGGTGG AGCGATGGCA TGAGCCATGT TCGCCCTGAG
AATATGCCCG CTAAAGTGCA GTCTAATATT TGGGATGTGA TTGCCCATAA AGGCTATGAG
CGCGCCAATC AGCAGGCGAA TCTTGGTTGG GAAACCGTGC TCTCTAATCC TGAGGTGTTG
TACTTTGATT TCCCCTATGA GGCCGATCCT AAGGAGCATG GCTATTACTG GGCGAGTCGC
GCGACCAACA GCCATAAAGT CTTTAGCTTT ATGCCAGATA ACTTGGCCGC CAATGCCGAG
CAATGGACCG ATATTCAAAA TCAGCCGTTC GAAGCGGACG ACAGAATAAA ACTTGATGAG
GCGGGTAAAA AAATCTCGGG TCCAAGGGAG AAAGGCAAAC CTTTTACTGG CTTGCAAGGG
CAGGTTTGGA GTGAGTCGAT TCGCAGTGAC GATACAATTG AATACATGGT GTTCCCGCGT
TTGTTGATGT TGGCTGAGCG TGCTTGGCAT CAAGCCGCAT GGGAAGTGCC TTATCAATAT
CAAGGCGCTA TATATAATCA AAGCTCGCGC GCTTTTACTT TAGCCATGCG TGATGCACAG
GCAAAGGATT GGCAACAACT CGCGAATACT TTAGGCCACA AAGAGTTTAT TAAGTTAGAT
AAAGCGGGGA TTGATTATCG CGTACCGACG GTCGGCGCCG AGATCCGTGA AGGTAAACTG
TTTGCTAATA TCGCCTATCC CGGACTCAAA CTGGAATACC GAAGCCTAAA TGGCCAATGG
CAAGCTTATC AAGCGGGGCA GGCGGTCACT GCACCGATTG AGGTCCGTGC CATAGCTGCC
GATGGTATTC GTAAAGGCCG AAGTTTAATC GTTAACTAA
|
|---|
| Protein sequence | MNKTLSASAI LLALGLAACS EAPVTPSSAS ANKAVTQTQQ AQDALTQAQL QQLGDSLVVT
YRVVTNVPDD KCLKDKADGR CFVAQIDFVP GMDLASQDWE IYLSQMRPVQ SVESGELTIT
HVKGDLHRIT PTAAFKGFVK GEKKQLTFRG EPWQLAETDA MPNYYLAANG LEPVIIASTQ
VGKDAETGLE TRPYVEGFTN FKTQYQRTET DKLAPADAAQ LFKANQSVSE DAALAVDTII
PTPQKVKIHS TDTPVSLAGG IKVEYQQDNP EQKSQVAAAV ARLARLGVAE SASGITVKFA
SQKGDEGSYR LDIQPTEIVI AANDAAGFSY GLSSLASLVD VNSLKVNAMT IEDSPRYPFR
GMHIDVARNF HSKQLLLDLL DQMAAYKLNK LHLHMADDEG WRLEIDGLPE LTDIGSKRCH
DLDENSCLLP QLGSGPFGDT SVNGYYTKQD YIDIVKYAEA RQIQVIPSMD MPGHSRAAIK
AMDARFRRLQ SEDVELQNTG KVQVVPVQET VNQASTAVKA LDAGARQLQA EGKTTAAEQY
LLSDANDKTV YSSVQYYDDN TLNVCMESTY QFVDKVIDEI AKLHQAAGQP LTRYHIGADE
TAGAWKQSPQ CLAFVANNDK GVKSIDDLGA YFIERISTML AAKGIEAAGW SDGMSHVRPE
NMPAKVQSNI WDVIAHKGYE RANQQANLGW ETVLSNPEVL YFDFPYEADP KEHGYYWASR
ATNSHKVFSF MPDNLAANAE QWTDIQNQPF EADDRIKLDE AGKKISGPRE KGKPFTGLQG
QVWSESIRSD DTIEYMVFPR LLMLAERAWH QAAWEVPYQY QGAIYNQSSR AFTLAMRDAQ
AKDWQQLANT LGHKEFIKLD KAGIDYRVPT VGAEIREGKL FANIAYPGLK LEYRSLNGQW
QAYQAGQAVT APIEVRAIAA DGIRKGRSLI VN
|
|---|
| |